DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TfAP-2 and aptf-2

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001255740.1 Gene:aptf-2 / 190458 WormBaseID:WBGene00013383 Length:367 Species:Caenorhabditis elegans


Alignment Length:220 Identity:64/220 - (29%)
Similarity:107/220 - (48%) Gaps:15/220 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 PALDDNVAFMSDL-PLIK-SMKSGKEAGNIGSGSP-SEVFCAVPGRLSLLSSTSKYKVTIAEVQR 272
            |.:.:||....:| |:|: ::.||.|.     .|| .:.|..|.||||:..:.:.|.||:.|::|
 Worm   117 PKMSNNVRKNINLTPVIENAVPSGFEL-----ESPKDQAFDVVHGRLSMGQNQTCYFVTVEEMRR 176

  Fly   273 RLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEGEATHLA 337
            ||..||.||:|.:...|:|.|.||||.|:|.:|...|:.:....::.|....:.:|||.||.||.
 Worm   177 RLQSPEKLNSSSIACNLKRPKLKNGGELMRAQLRDHGIKVQLNAKQKAFPNKVIALVEAEAVHLG 241

  Fly   338 KDFHFVCETEFPARQLAEYIVRHQTEPQDSYRRKELILHSQQITKELMQILSQDRTTHFGTRSQH 402
            .|.......::|.:.:.:.:.......:|:  ..:.:::.:..| |.|..|....|:.....:..
 Worm   242 LDLGTAVRDDYPVQDIIQEVAHEALADEDA--DLDALMNDKDFT-ECMSALESVFTSVVPPITGI 303

  Fly   403 LLEPSMQRHLTH----FSLITHGFG 423
            ..:||....|.:    ||..:||.|
 Worm   304 EPKPSNNMRLNNGMETFSSASHGLG 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 53/181 (29%)
aptf-2NP_001255740.1 TF_AP-2 151..345 CDD:367440 53/181 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167678
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10812
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.