DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfAP-2 and aptf-3

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_495819.1 Gene:aptf-3 / 185047 WormBaseID:WBGene00009203 Length:535 Species:Caenorhabditis elegans


Alignment Length:450 Identity:99/450 - (22%)
Similarity:167/450 - (37%) Gaps:116/450 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HSGHSSTHGSAATMHHQSLQSDFQPPYFPPPFHHSTQSPPQ------------------QQISGY 100
            :||..|...:....:|...|..|.....|||..|:.|.|.|                  |.::|.
 Worm    66 NSGWQSFDVNQVYNNHNMNQPGFGWVALPPPMPHNLQIPDQNSYKPRSGLPVPPPMAEFQDVNGI 130

  Fly   101 LQNHGALEYLGTDPYGQPLSSLHHAPLHHYNQLAGLRSTQDQLGIHRTHREA-ELQGHVTQLSHG 164
            .||...:.      ...|::|....|....:....|...||...:..|.:|. |.:..|..:   
 Worm   131 QQNPNEIF------KNAPITSAMCTPESDISTSTNLTPDQDSAQLPLTEQELNEEKNFVVNI--- 186

  Fly   165 FPYTDRRSDYGSAISAGAAHGTRLGHEHESLALHQALQNAVDDVQAPALDDNVAFMSDLPLIKSM 229
                                      |......|..|.| |:..|.|  ::::.:    |..||:
 Worm   187 --------------------------ESPGKLAHYFLPN-VESEQEP--NEHIPY----PYAKSL 218

  Fly   230 -----KSGKEAGNIGSGSPSEVFCAVPGRLSLLSSTSKYKVTIAEVQRRLSPPECLNASLLGGVL 289
                 ......||:    .:||   |.|||..:.:.|||.:|:.|::||...||.:|.|.|....
 Worm   219 FPTFGVPVSSDGNV----VAEV---VDGRLPAVGTRSKYDITVDEIRRRCGAPEHMNQSALYCFF 276

  Fly   290 RRAKSKNGGRLLREKL--EKIGLNLPAGRRKAANVTLLTSLVEGEATHLAKDFHFVCETEFP--- 349
            |::|.:.....:::.|  ..|.:.....:||   ||..:..:|.|||.||:|...:.|...|   
 Worm   277 RKSKKREAINRVKQVLTVHNIPMRTMQRQRK---VTCFSPFLEEEATALARDLDSISEEFLPINI 338

  Fly   350 -ARQLAEYIVRHQTEPQDSYRR------------KELILHSQQIT--KELMQILSQDRTTHFGTR 399
             |:::.|.::.........:|.            |.|.:...:||  :|.::..:.|.:.|    
 Worm   339 IAQEMLEKLMSSGNNLDVCHRMLKNTTATITRVIKTLEVRQPKITGQEEKLKGNNLDLSYH---- 399

  Fly   400 SQHLLEPSMQRHLTHFSLITHGFGSPAIMAVLHAFQTFLNESLNYLEKLYPSNGGGMVSS 459
                          :|||||||||.|..::...::.:.:..::...||:  .||..::|:
 Worm   400 --------------NFSLITHGFGHPNSLSHYRSYLSIVERAVLLCEKI--QNGQSLLSN 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 53/213 (25%)
aptf-3NP_495819.1 TF_AP-2 235..427 CDD:367440 55/215 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167679
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3811
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10812
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.800

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