DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfAP-2 and aptf-4

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_495818.1 Gene:aptf-4 / 174376 WormBaseID:WBGene00009202 Length:486 Species:Caenorhabditis elegans


Alignment Length:392 Identity:90/392 - (22%)
Similarity:152/392 - (38%) Gaps:75/392 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 QPPYFPPPFHHS----TQSPPQQQISGYLQNHGALEYLGTDPYGQPLSSLHHAPLHHYNQLAGLR 137
            |||..|..|:.:    |.:||..:   :...||..:....:....|:||:.:.|....:..:. .
 Worm    96 QPPPMPQDFYKARPGQTVTPPMNE---FHNAHGTQQTPNDNSGNLPISSVMYTPESDLSTTSA-N 156

  Fly   138 STQDQLGIHRTHREAELQGHVTQLSHGFPYTDRRS----DYGSAISAGAAHGTRLGHEHESLALH 198
            .|.|    ..|..............:.||..|..|    ||       ....|...:|.|:...|
 Worm   157 FTPD----WNTTTNGPCNQEKRNKENLFPNDDTSSGKLFDY-------FLTNTERENESENNIPH 210

  Fly   199 QALQNAVDDVQAPALDDNVAFMSDLPLIKSMKSGKEAGNIGSGSPSEVFCAVPGRLSLLSSTSKY 263
            ...:........|...|                    ||:    .:||   |.|||..:.:.|||
 Worm   211 PYNKAVFPTFGVPVSSD--------------------GNV----VAEV---VDGRLPAVGTRSKY 248

  Fly   264 KVTIAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSL 328
            .:|:.|::||...||.:|.|.|....|::|.|.....:::.|....:.:...:|: ..||..:..
 Worm   249 DLTVDELRRRCGAPEHMNQSALYCFFRKSKKKEAINRVKKVLTDYNITVRTMQRQ-RKVTCFSPF 312

  Fly   329 VEGEATHLAKDFHFVCETEFP----ARQLAEYIVRHQTEPQDSYRRKEL-----ILH--SQQITK 382
            :|.|||.||:|...:.|...|    |.::.|.::         :..|.|     ||.  ::.||:
 Worm   313 LEEEATALARDLDSITEEFLPIDAIALEMLEKLI---------FNNKNLDICLRILKNTNKTITR 368

  Fly   383 ELMQI-LSQDRTTHFGTRSQHLLEPSMQRHLTHFSLITHGFGSPAIMAVLHAFQTFLNESLNYLE 446
            .:..: :.|.:.|   .:.:.|...|:.....:|||.|||||.|..::...::|..:.::..|.|
 Worm   369 VIKTLEVRQPKIT---GQKEKLKGNSLDLSYHNFSLTTHGFGHPNSLSHYRSYQKIVEQAALYCE 430

  Fly   447 KL 448
            |:
 Worm   431 KM 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 54/205 (26%)
aptf-4NP_495818.1 TF_AP-2 233..425 CDD:367440 56/207 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167677
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3811
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10812
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.800

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