DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfAP-2 and tfap2e

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001123400.1 Gene:tfap2e / 100170172 XenbaseID:XB-GENE-876803 Length:434 Species:Xenopus tropicalis


Alignment Length:471 Identity:219/471 - (46%)
Similarity:278/471 - (59%) Gaps:80/471 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HGSLGLSSGSAAYTTHSGGHTGR-----SGPATGHSGHSSTHGSAATMHHQSLQSDFQPPYFPPP 84
            |....:....|.....|||...:     .||          :.||..:.| :..|||||||||||
 Frog     4 HAYSAMDRSEALNGAASGGRLSQLSSLNQGP----------YSSAPPLCH-TPASDFQPPYFPPP 57

  Fly    85 FHHSTQSPPQQQISGYLQNHGALEYLGTDPYGQPLSSLH-------HAPLHHYNQLAGLRSTQDQ 142
            :.....|..|.|.|||       .:|| |||.. ::|:|       |.|          ||.|::
 Frog    58 YPQPPLSYSQSQESGY-------PHLG-DPYSS-INSIHQHQQPSWHTP----------RSRQEE 103

  Fly   143 LG-IHRTHREAELQGHVTQLSHGFPYTDRRSDYG--SAISAGAAHGTRLGHE--HESLALHQALQ 202
            .| :.:|||...|              |.|.|||  |.:..|...|   ||.  ..||::|....
 Frog   104 TGLLSQTHRGLSL--------------DPRRDYGGMSRLIPGLTDG---GHSLADSSLSIHALSH 151

  Fly   203 NAVDDVQAPALDDNVAFMSDLPLIK----------SMKS----GKEAGNIGSGSPSEVFCAVPGR 253
            ::::|:|  :||::...:.|..:||          ||.|    .||:...|..:|:||||:||||
 Frog   152 HSLEDMQ--SLDESGVSILDQSVIKKVPIPSKNNGSMMSVLSMHKESLIGGVTNPNEVFCSVPGR 214

  Fly   254 LSLLSSTSKYKVTIAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRK 318
            |||||||||||||:.|||||||||||||||||||||||||||||||.|||:||||||||||||||
 Frog   215 LSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRK 279

  Fly   319 AANVTLLTSLVEGEATHLAKDFHFVCETEFPARQLAEYIVRHQTEPQDSYRRKELILHSQQITKE 383
            |||||||||||||||.|||:||.:||||||||:..|||:.|..::|.:.:.||.::|.::||.||
 Frog   280 AANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHSDPTELHARKNMLLATKQICKE 344

  Fly   384 LMQILSQDRTTHFGTRSQHLLEPSMQRHLTHFSLITHGFGSPAIMAVLHAFQTFLNESLNYLEKL 448
            ...:|:|||:....:|...:|||.:|..||||||||||||.|||.|.|.|||.:|.|||..::|:
 Frog   345 FADLLAQDRSPLGNSRPSLILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGMDKI 409

  Fly   449 YPSNGGGMVSSSLDKS 464
            :.|:.|...|::..||
 Frog   410 FMSSTGNGHSAAESKS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 137/193 (71%)
tfap2eNP_001123400.1 TF_AP-2 206..404 CDD:281315 141/197 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 277 1.000 Domainoid score I1688
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I2326
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287275at33208
OrthoFinder 1 1.000 - - FOG0000991
OrthoInspector 1 1.000 - - otm48084
Panther 1 1.100 - - LDO PTHR10812
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10438
SonicParanoid 1 1.000 - - X400
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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