Protein Alignment EMC10 and SMC3

DIOPT Version :9

• Sequence 1: NP_730662.2
• Gene: EMC10 / 40396
• FlyBaseID: FBgn0052441
• Length: 227
• Species: Drosophila melanogaster
• Sequence 2: NP_523374.2
• Gene: SMC3 / 32627
• FlyBaseID: FBgn0015615
• Length: 1200
• Species: Drosophila melanogaster
• Alignment Length: 118
• Identity: 28/118 - (23%)
• Similarity: 46/118 - (38%)
• Gaps: 24/118 - (20%)

  Fly    74 LLKKLALGNEFYRLKATVVYSNGAKAQFITSNKACRLLQAQLNDVLWVS----LEPSGYVTGITV 134
            |.||:...||...|..:        |.|.:||....:.|.::|.:...:    |:....|.|..|
  Fly   111 LNKKVVPRNEVVNLLES--------AGFSSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRV 167

  Fly   135 SQDTAPATIECTQEDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVERERE 187
            ..       |..:|.:|.|.||....:.:..:  |..:.|.   :|.:|.|:|
  Fly   168 YD-------ERKEESLNLLRETDSKVEKISEY--LKTIEDR---LQTLEEEKE 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EMC10	NP_730662.2	None
SMC3	NP_523374.2	SMC_N	2..1180	CDD:280601	28/118 (24%)
		ABC_SMC3_euk	3..>159	CDD:213239	13/55 (24%)
		SMC_hinge	533..643	CDD:214944
		TMPIT	678..>760	CDD:285135
		CHD5	<780..>822	CDD:282299
		P-loop_NTPase	<1088..1182	CDD:304359

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1196
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900