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Protein Alignment EMC10 and Smc4
DIOPT Version :9
Sequence 1: | NP_730662.2 |
Gene: | EMC10 / 40396 |
FlyBaseID: | FBgn0052441 |
Length: | 227 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001032262.2 |
Gene: | Smc4 / 295107 |
RGDID: | 1306680 |
Length: | 1286 |
Species: | Rattus norvegicus |
Alignment Length: | 148 |
Identity: | 36/148 - (24%) |
Similarity: | 64/148 - (43%) |
Gaps: | 36/148 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 VEQPDLSTADLDLLKKLALGNE------FYRLKATVVYSNGAKAQFITSNKACR----LLQAQLN 116
::.|:.:....||:| :.|| ::.|:.|:|.:|..:|..:...:..| .||.|:
Rat 682 IQTPENTPRLFDLVK---VKNEEIRQAFYFALRDTLVANNLDQATRVAYQRDRRWRVVTLQGQI- 742
Fly 117 DVLWVSLEPSGYVTG----ITVSQDTAPATIECTQEDVNKLLETQFSTDVLIRHAELA------P 171
:|.||.:|| :...:..:....|.:.|:||| :|.| |.||::.| .
Rat 743 ------IEQSGTMTGGGSKVMRGRMGSSVVDEISVEEVNK-MECQ-----LERHSKQAAQVQEQK 795
Fly 172 VPDTAGFIQKVEREREAR 189
|......::..:.|||.|
Rat 796 VQHEEAIVKLKQSEREMR 813
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1196 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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