DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC10 and Emc10

DIOPT Version :10

Sequence 1:NP_730662.2 Gene:EMC10 / 40396 FlyBaseID:FBgn0052441 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001004221.2 Gene:Emc10 / 292878 RGDID:1303214 Length:268 Species:Rattus norvegicus


Alignment Length:208 Identity:64/208 - (30%)
Similarity:111/208 - (53%) Gaps:23/208 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITVELQHSL-AANSESFSFRGNVTIPSLNSGLANVEQPDLSTADLDLLKKLALGNEFYRLK---- 88
            :.:.|:||. ..:..:|..||:: :.:...|..:..|..||..:...|:.:|..|..||::    
  Rat    62 VALLLEHSFEIGDGANFQKRGSL-LWNQQDGTLSATQRQLSEEERGRLRDVAAVNGLYRVRVPRR 125

  Fly    89 -ATVVYSNGAKAQFITSN--KACRLLQAQLNDVLWVSLEPSGYVTGITVSQDTAPATI---ECTQ 147
             .|:   :|::|....|:  .||.|:::.|:|.|.:.::.:|.|.|::|.  ..|...   |...
  Rat   126 PGTL---DGSEAGGHVSSFVPACSLVESHLSDQLTLHVDVAGNVVGLSVV--VYPGGCRGSEVED 185

  Fly   148 EDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVEREREARERGEVRDNRGFFAKYWMYIVPVV 212
            ||:.     .|:|.|.:|....||.|:||.||:::|.| :|::....::.:.|||||||||:|||
  Rat   186 EDLE-----LFNTSVHLRPPGTAPGPETAAFIERLEME-QAQKAKNPQEQKSFFAKYWMYIIPVV 244

  Fly   213 LLVFISGATNQDG 225
            |.:.:|||.:..|
  Rat   245 LFLMMSGAPDAGG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC10NP_730662.2 EMC10 29..173 CDD:412067 39/154 (25%)
Emc10NP_001004221.2 EMC10 62..206 CDD:412067 39/154 (25%)

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