DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and or70a12

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_571817.1 Gene:or70a12 / 80360 ZFINID:ZDB-GENE-010309-2 Length:312 Species:Danio rerio


Alignment Length:328 Identity:77/328 - (23%)
Similarity:141/328 - (42%) Gaps:67/328 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLF-SLAVSDLLYLLF 120
            |....|||.:  :|:.|::  :||  :|.|:.:.|.|.....:|... |.|| :|.::|:     
Zfish    18 VTSQSTLPTF--ILLLIVY--VFI--MVSNIGMMIQISADKCLHQPM-YVLFCNLTLNDV----- 70

  Fly   121 GLPTEVFLYWHQYPDLFGMPF--------CKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHL 177
             |.|.||:. |...:|...|.        |.|:|:.:......|...|:..:.:|::|||:||..
Zfish    71 -LGTTVFMP-HVLKNLLKDPSKCYITFVECAIQAYFTHLNGTASHTVIMIMAFDRYVAICNPLRY 133

  Fly   178 YAMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSR-IEESAFC--------SMSPK 233
            .|::.....:::..|.|   .::|:..|:|..   |:..|.|.| :.:...|        |....
Zfish   134 PAIMTSNMVVKLSIAAW---GVAAVLVGILIG---LSVRLSHCRSVIQGNVCDNASLFKLSCENT 192

  Fly   234 IVNEIPVFEVSF-CIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVI 297
            :||.  |:.::| .:.|...::.:.|.|.:: |.:..::..|     .||::..:.........|
Zfish   193 VVNN--VYGLTFTVVLFTSSIVCVALTYLKI-AMVCFKSKNK-----ATNSKAVKTCSTHLTVYI 249

  Fly   298 RMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYV-SCTVNPIVYSVMSR 361
            .||.:..:|.|       |.|.: .||:..           .:||..::| ...:|||:|.:.|:
Zfish   250 IMLISGSVTIF-------LHRFV-TYAETR-----------KLAGIIFHVIPPGLNPIIYGIQSK 295

  Fly   362 RYR 364
            ..|
Zfish   296 EIR 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 68/300 (23%)
7tm_1 85..356 CDD:278431 65/290 (22%)
or70a12NP_571817.1 7tm_4 33..308 CDD:304433 71/311 (23%)
7tm_1 41..290 CDD:278431 65/289 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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