DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and gpr39

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_956711.1 Gene:gpr39 / 791773 ZFINID:ZDB-GENE-040426-1395 Length:440 Species:Danio rerio


Alignment Length:436 Identity:112/436 - (25%)
Similarity:198/436 - (45%) Gaps:64/436 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGN---LLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVF-LY 129
            |.:|:::..|...||:||   :.|..|:.|:..:..:...::.|||.||||.||.|||.|:: ..
Zfish    21 VFLTVLYCLILSLGVLGNSATIHVAQVLQRNGYLQRSVAEHMVSLACSDLLVLLIGLPVELYSAI 85

  Fly   130 WHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIITALW 194
            |..:....|...|:|..|:.|.|:|.::..:...|:||:||||||....|:.| .|..|::.|.|
Zfish    86 WFPFLSRSGDAACRIYNFLFELCSYATILNVATLSLERYLAICHPFRYRALRG-GRTRRLLLAAW 149

  Fly   195 IVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFC-SMSPKIVNEIPVFEVSFCIFFVIPMI---- 254
            :.|.:.|:|..:.:..:........:.::...|| |:|...|    ::..|....||:.::    
Zfish   150 LCSALVALPLLVATGTEGYVPAGRQTPVQNLTFCTSLSQHWV----MYRTSIFTAFVLYLLVLAG 210

  Fly   255 -------LIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWF 312
                   :|::|...||.       .:.|......::..|....||:|:: .|..:|...||||.
Zfish   211 VAFMCRAMILVLRAPMGP-------AEAGASGDHKHQSARGKASRKQTIL-FLVLIVCALFVCWM 267

  Fly   313 PFHLQRLIFLYAKNMD---NYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAF-RELLCG 373
            |..::||:........   :||.....|..:|...:|:|..:||::|::.||::|.|| :.|||.
Zfish   268 PNQIRRLMTAAVPKSSWTGSYLTSYIKLHPVADSFFYLSSVLNPMLYNLSSRQFRSAFLQTLLCR 332

  Fly   374 KAV-----GAYYNSGFARDHSSFRESSAYDRVHSVHVRASQHPNKFETDSSSANRVLIKKTYSLP 433
            .::     ....|||.::..::.........::.:.:..|..    .|..|||.|          
Zfish   333 LSLQHANRRTLENSGASKSSNNTLRPLLQRSLNRIRMATSSR----STPPSSAER---------- 383

  Fly   434 LPKNADSTVLSTTDI-----VIVLENSHTVCEEPKVENDIWIENEE 474
                .||  |:|||.     .:.|:..:|. ..|:.|.::..:::|
Zfish   384 ----RDS--LNTTDRPQGEGKLTLDPQNTT-NWPQGEGELTSDSQE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 87/308 (28%)
7tm_1 85..356 CDD:278431 78/289 (27%)
gpr39NP_956711.1 7tm_1 37..314 CDD:278431 78/289 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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