DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Gpr39

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_081953.2 Gene:Gpr39 / 71111 MGIID:1918361 Length:456 Species:Mus musculus


Alignment Length:405 Identity:98/405 - (24%)
Similarity:186/405 - (45%) Gaps:34/405 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGN---LLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVF-LY 129
            :.:.:::..||:.|::||   :.|..|:.:...:......::.|||.||:|..|.|:|.|.: :.
Mouse    31 ITLILVYLIIFVVGILGNSVTIRVTQVLQKKGYLQKEVTDHMVSLACSDILVFLIGMPMEFYSII 95

  Fly   130 WHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIITALW 194
            |:..........||:..|:.|.|:|.::..::..|.||::|||||....|:.|.::...:|..:|
Mouse    96 WNPLTTPSYALSCKLHTFLFETCSYATLLHVLTLSFERYIAICHPFKYKAVSGPRQVKLLIGFVW 160

  Fly   195 IVSFISAIPFGLLSDIQY----------LNYPLDHSRIEE---SAFCSMSPKIVNEIPVFEVS-- 244
            :.|.:.|:|......|:|          ||..|..:|..:   ::..|:...:.|...||:.|  
Mouse   161 VTSALVALPLLFAMGIEYPLVNVPTHKGLNCNLSRTRHHDEPGNSNMSICTNLSNRWEVFQSSIF 225

  Fly   245 --FCIFFVIPMILIILLYGRMGAKIRSR--TNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVI 305
              |.::.|:...:..:.:..|...::|:  |....|.|......|:..|:..::..|..|..:|:
Mouse   226 GAFAVYLVVLASVAFMCWNMMKVLMKSKQGTLAGTGPQLQLRKSESEESRTARRQTIIFLRLIVV 290

  Fly   306 TFFVCWFPFHLQRLIFLYAKNMD---NYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAF 367
            |..|||.|..::|::.......|   .|......|...:...:|:|..|||::|:|.|:::|..|
Mouse   291 TLAVCWMPNQIRRIMAAAKPKHDWTRTYFRAYMILLPFSDTFFYLSSVVNPLLYNVSSQQFRKVF 355

  Fly   368 RELLCGKAVGAYYNSGFARDHSSF---RESSAYDRVHSVHVRASQHPNKFETDSSSANRVLIKKT 429
            .::||.:....:.|.. .|..:.|   ::|::..|...:.: ||:..|   :.|...|:|.:...
Mouse   356 WQVLCCRLTLQHANQE-KRQRARFISTKDSTSSARSPLIFL-ASRRSN---SSSRRTNKVFLSTF 415

  Fly   430 YSLPLPKNADSTVLS 444
            .:...|..|....||
Mouse   416 QTEAKPGEAKPQPLS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 80/314 (25%)
7tm_1 85..356 CDD:278431 73/296 (25%)
Gpr39NP_081953.2 7tm_1 47..344 CDD:278431 73/296 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..456 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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