DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Olfr701

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001347676.1 Gene:Olfr701 / 66786 MGIID:3030535 Length:316 Species:Mus musculus


Alignment Length:349 Identity:72/349 - (20%)
Similarity:133/349 - (38%) Gaps:102/349 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGG------------IFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFG 121
            :|:.|:.|.            :::..::.|.|:.:||...:.:|......|..|::.|||:....
Mouse    13 ILVGILDGSGSPELLCATVTTLYMLALISNGLLLLVITVDARLHVPMYLLLRQLSLIDLLFTSVV 77

  Fly   122 LPTEV--FLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFK 184
            .|..|  ||.........|   |.::.|.:..........:...:.:|::||||||: |.:....
Mouse    78 TPNTVVDFLLRDNTISFEG---CALQLFSAMTLGGAEDLLLAFMAYDRYVAICHPLN-YMIFMSP 138

  Fly   185 RAIRIITAL-WIVSFISAI---------PFGLLSDIQYLNYPLDHSRIEESAFCSMSPKI----- 234
            :|.|::.|: ||::.:||:         ||.:..:|::|             .|.:.|.:     
Mouse   139 KACRLMVAISWILASLSALGHTVYTMHFPFCMSQEIRHL-------------LCEVPPLLKLACA 190

  Fly   235 ---VNEIPVFEVSFCIFFVIPMILIILLY--------------GRMGAKIRSRTNQKLGVQQGTN 282
               ..|:.|: |:..||.::|:..||..|              ||..|.:               
Mouse   191 DTSQYELMVY-VTGVIFLLLPLSAIITSYSLILFTVLHMPSNEGRKKALV--------------- 239

  Fly   283 NRETRNSQMRKKTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYV 347
               |.:|.:   ||:.|........:|....||        :...||.:.:         |...|
Mouse   240 ---TCSSHL---TVVGMFYGGATFMYVLPSSFH--------SPKQDNIISV---------FYTIV 281

  Fly   348 SCTVNPIVYSVMSRRYRVAFRELL 371
            :..:||::||:.::....|.|.:|
Mouse   282 TPALNPLIYSLRNKEVIGAVRRVL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 69/321 (21%)
7tm_1 85..356 CDD:278431 64/304 (21%)
Olfr701NP_001347676.1 7tmA_OR2T-like 26..300 CDD:320543 66/329 (20%)
TM helix 1 26..52 CDD:320543 4/25 (16%)
TM helix 2 59..85 CDD:320543 7/25 (28%)
TM helix 3 97..127 CDD:320543 4/29 (14%)
TM helix 4 140..161 CDD:320543 7/20 (35%)
TM helix 5 195..225 CDD:320543 9/30 (30%)
TM helix 6 232..262 CDD:320543 9/50 (18%)
TM helix 7 269..294 CDD:320543 8/33 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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