DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Nmur2

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_071611.3 Gene:Nmur2 / 64042 RGDID:621155 Length:395 Species:Rattus norvegicus


Alignment Length:330 Identity:119/330 - (36%)
Similarity:202/330 - (61%) Gaps:22/330 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVS 113
            |.:|::|.:.||:...|  ::.:::.:..||:.||:||||||:||:||..:.|.|||||||||||
  Rat    20 STEEYLAHLCGPKRSDL--SLPVSVAYALIFLVGVMGNLLVCMVIVRHQTLKTPTNYYLFSLAVS 82

  Fly   114 DLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLY 178
            |||.||.|:|.|::..||.||.|||...|..:..:.|...:.|:.::...|:||::||.||....
  Rat    83 DLLVLLLGMPLEIYEMWHNYPFLFGPVGCYFKTALFETVCFASILSVTTVSVERYVAIVHPFRAK 147

  Fly   179 AMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMS-PKIVNEIPVFE 242
            .....:||:||::.:|..|.:.::|...:..|::.::| :.|.:..||.|::: |..|..:.:..
  Rat   148 LESTRRRALRILSLVWSFSVVFSLPNTSIHGIKFQHFP-NGSSVPGSATCTVTKPMWVYNLIIQA 211

  Fly   243 VSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNN--RETRNSQMRKKTVIRMLAAVVI 305
            .|| :|:::||.||.:||..||  :|.:.::.|...:...|  |.:|      |:|.:||..:|:
  Rat   212 TSF-LFYILPMTLISVLYYLMG--LRLKRDESLEANKVAVNIHRPSR------KSVTKMLFVLVL 267

  Fly   306 TFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFS----IAGFAYYVSCTVNPIVYSVMSRRYRVA 366
            .|.:||.|||:.||.|.:   ::.:.:...|:|:    ::|..:|:|..||||:|:::|||:|.|
  Rat   268 VFAICWTPFHVDRLFFSF---VEEWTESLAAVFNLIHVVSGVFFYLSSAVNPIIYNLLSRRFRAA 329

  Fly   367 FRELL 371
            ||.::
  Rat   330 FRNVV 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 109/294 (37%)
7tm_1 85..356 CDD:278431 101/277 (36%)
Nmur2NP_071611.3 7tm_4 48..333 CDD:304433 112/297 (38%)
7tm_1 54..319 CDD:278431 101/277 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..395
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338872
Domainoid 1 1.000 183 1.000 Domainoid score I3347
eggNOG 1 0.900 - - E33208_3BGH7
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H49618
Inparanoid 1 1.050 217 1.000 Inparanoid score I3505
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 1 1.000 - - FOG0001494
OrthoInspector 1 1.000 - - mtm8974
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X673
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.860

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