DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Nmur2

DIOPT Version :10

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_071611.3 Gene:Nmur2 / 64042 RGDID:621155 Length:395 Species:Rattus norvegicus


Alignment Length:330 Identity:119/330 - (36%)
Similarity:202/330 - (61%) Gaps:22/330 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVS 113
            |.:|::|.:.||:...|  ::.:::.:..||:.||:||||||:||:||..:.|.|||||||||||
  Rat    20 STEEYLAHLCGPKRSDL--SLPVSVAYALIFLVGVMGNLLVCMVIVRHQTLKTPTNYYLFSLAVS 82

  Fly   114 DLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLY 178
            |||.||.|:|.|::..||.||.|||...|..:..:.|...:.|:.::...|:||::||.||....
  Rat    83 DLLVLLLGMPLEIYEMWHNYPFLFGPVGCYFKTALFETVCFASILSVTTVSVERYVAIVHPFRAK 147

  Fly   179 AMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMS-PKIVNEIPVFE 242
            .....:||:||::.:|..|.:.::|...:..|::.::| :.|.:..||.|::: |..|..:.:..
  Rat   148 LESTRRRALRILSLVWSFSVVFSLPNTSIHGIKFQHFP-NGSSVPGSATCTVTKPMWVYNLIIQA 211

  Fly   243 VSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNN--RETRNSQMRKKTVIRMLAAVVI 305
            .|| :|:::||.||.:||..||  :|.:.::.|...:...|  |.:|      |:|.:||..:|:
  Rat   212 TSF-LFYILPMTLISVLYYLMG--LRLKRDESLEANKVAVNIHRPSR------KSVTKMLFVLVL 267

  Fly   306 TFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFS----IAGFAYYVSCTVNPIVYSVMSRRYRVA 366
            .|.:||.|||:.||.|.:   ::.:.:...|:|:    ::|..:|:|..||||:|:::|||:|.|
  Rat   268 VFAICWTPFHVDRLFFSF---VEEWTESLAAVFNLIHVVSGVFFYLSSAVNPIIYNLLSRRFRAA 329

  Fly   367 FRELL 371
            ||.::
  Rat   330 FRNVV 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tmA_capaR 83..367 CDD:320262 107/290 (37%)
TM helix 2 103..129 CDD:320262 19/25 (76%)
TM helix 3 142..172 CDD:320262 7/29 (24%)
TM helix 4 184..206 CDD:320262 7/21 (33%)
TM helix 5 237..266 CDD:320262 11/28 (39%)
TM helix 6 291..321 CDD:320262 13/29 (45%)
TM helix 7 335..360 CDD:320262 10/28 (36%)
Nmur2NP_071611.3 7tm_GPCRs 38..330 CDD:475119 110/304 (36%)
TM helix 1 40..64 CDD:410628 12/23 (52%)
TM helix 2 73..95 CDD:410628 17/21 (81%)
TM helix 3 112..134 CDD:410628 2/21 (10%)
TM helix 4 157..173 CDD:410628 4/15 (27%)
TM helix 5 206..229 CDD:410628 8/23 (35%)
TM helix 6 259..281 CDD:410628 9/21 (43%)
TM helix 7 298..323 CDD:410628 8/24 (33%)
NmU-R2_C_term 323..389 CDD:466027 7/12 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..395
Blue background indicates that the domain is not in the aligned region.

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