DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and nmur1b

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_698473.4 Gene:nmur1b / 569960 ZFINID:ZDB-GENE-131121-154 Length:404 Species:Danio rerio


Alignment Length:387 Identity:133/387 - (34%)
Similarity:203/387 - (52%) Gaps:60/387 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NTPDTLFATSVSSDPSHGFGEEDYACGTFNCSPKE-------------------FVAFVLGPQTL 63
            ::|.:||...|:               |..||.||                   ::...|||...
Zfish     7 SSPSSLFTVVVN---------------TSWCSTKEEECQNRTANLSDLCLSRSAYLEKYLGPCRS 56

  Fly    64 PLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFL 128
            |.:..:.:|.:.  ||:.|||||:|.||||.||..|.|.|||||||||:||||.||.|||.|::.
Zfish    57 PFFLPICVTYLL--IFVVGVVGNILTCIVITRHRIMRTTTNYYLFSLAISDLLVLLLGLPLELYE 119

  Fly   129 YWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIITAL 193
            .|..||.|||:..|..:..:.|...:.||..:.|.|.||:.||.||||...:.....|.|:|..|
Zfish   120 LWSNYPFLFGISGCYFKTCLFETVCFASVLNVTALSAERYRAIIHPLHTKHVATSAHAKRVILVL 184

  Fly   194 WIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKIVNEIPVF----EVSFCIFFVIPMI 254
            |.||.:.|:|...:..::.|. |.......||..|:    :|::..::    :|:..:||::||:
Zfish   185 WAVSLLCALPNTSIHGVEMLK-PRFGLTFPESGVCT----VVHDRWIYNLLVQVTALLFFILPML 244

  Fly   255 LIILLYGRMGAKI---RSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWFPFHL 316
            .|.:||..:|.::   |...:.|:.:.|...|:..|:.|     |.:||.|:||.|.:||.|||:
Zfish   245 TISVLYVLIGLQLHRERECFDSKIVLNQDGVNQRARHRQ-----VTKMLCALVIVFGICWAPFHI 304

  Fly   317 QRLIFLYAKNMDNYLDINEALFS----IAGFAYYVSCTVNPIVYSVMSRRYRVAFRELLCGK 374
            .|:::.|   :|::...|..:|.    ::|..:|:|..||||:|::||.|:|..|||::|.|
Zfish   305 DRVMWSY---IDDWTAENHHIFEYVHLLSGVFFYLSSVVNPILYNLMSSRFREMFREVVCQK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 113/299 (38%)
7tm_1 85..356 CDD:278431 104/281 (37%)
nmur1bXP_698473.4 7tm_1 76..345 CDD:278431 104/281 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578485
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BGH7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46196
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 1 1.000 - - FOG0001494
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_117951
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X673
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.720

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