DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and OR1F12

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001342354.1 Gene:OR1F12 / 442179 HGNCID:13964 Length:337 Species:Homo sapiens


Alignment Length:349 Identity:71/349 - (20%)
Similarity:149/349 - (42%) Gaps:67/349 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLY-------LLFGLPTEV 126
            ||:..:|..:::||:.||||:.:.|.....:||...::|.:|::.||..       :|..:.|:.
Human    25 VLLFALFLCLYLTGLFGNLLILLAIGSDHCLHTPMYFFLANLSLVDLCLPSATVPKMLLNIQTQT 89

  Fly   127 FLYWHQYPD-LFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRII 190
            ...  .||. |..|.||.:.|.:..       |.:...:.:|::|||||||...::..:....::
Human    90 QTI--SYPGCLAQMYFCMMFANMDN-------FLLTVMAYDRYVAICHPLHYSTIMALRLCASLV 145

  Fly   191 TALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFC--------SMSPKIVNEIPVFEVSFCI 247
            .|.|:::.::.:...|:  :.:|::..|:  :....||        |.|...:|::.|. .:..:
Human   146 AAPWVIAILNPLLHTLM--MAHLHFCSDN--VIHHFFCDINSLLPLSCSDTSLNQLSVL-ATVGL 205

  Fly   248 FFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWF 312
            .||:|.:.|::.|..:.:.:     .|:...||         :::..:......|:||.|:    
Human   206 IFVVPSVCILVSYILIVSAV-----MKVPSAQG---------KLKAFSTCGSHLALVILFY---- 252

  Fly   313 PFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFRELL------ 371
                ..:..:|...:.|:....::..|:  ....|:..:||.:||:.:...:...::.|      
Human   253 ----GAITGVYMSPLSNHSTEKDSAASV--IFMVVAPVLNPFIYSLRNNELKGTLKKTLSRPGAV 311

  Fly   372 ---CGKAV----GAYYNSGFARDH 388
               |..:.    |.:......|||
Human   312 AHACNPSTLGGRGGWIMRSGDRDH 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 62/313 (20%)
7tm_1 85..356 CDD:278431 58/286 (20%)
OR1F12NP_001342354.1 7tmA_OR1_7-like 26..294 CDD:320584 64/305 (21%)
TM helix 1 26..52 CDD:320584 9/25 (36%)
TM helix 2 59..85 CDD:320584 5/25 (20%)
TM helix 3 97..127 CDD:320584 8/36 (22%)
TM helix 4 140..161 CDD:320584 2/20 (10%)
TM helix 5 195..225 CDD:320584 7/30 (23%)
TM helix 6 232..262 CDD:320584 7/46 (15%)
TM helix 7 269..294 CDD:320584 6/26 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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