Protein Alignment CapaR and ETHR

DIOPT Version :10

• Sequence 1: NP_996140.1
• Gene: CapaR / 40393
• FlyBaseID: FBgn0037100
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_650960.2
• Gene: ETHR / 42523
• FlyBaseID: FBgn0038874
• Length: 471
• Species: Drosophila melanogaster
• Alignment Length: 449
• Identity: 117/449 - (26%)
• Similarity: 192/449 - (42%)
• Gaps: 95/449 - (21%)

  Fly    60 PQTLPLY---KAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFG 121
            || :|.|   .|:...|:   |.:.|||||::|.|||::...|..:||.:|.:|:::|||.||..
  Fly     3 PQ-IPSYIRTTAMFFCIV---IMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVC 63

  Fly   122 LPTEVFLYWHQYPD--LFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFK 184
            .|| |.:..:..|:  :.|...||...|:.....:.||.||:|.|.||:.|||.||....:....
  Fly    64 TPT-VLVEVNTRPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKG 127

  Fly   185 RAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKIVNEIPVFEVSFCIFF 249
            |||.|....|.::.:...|...:::.:...| :|.|.:   |.|.........:..|.::..:||
  Fly   128 RAILICVLAWGIAALFTSPILWVAEYKLAEY-IDGSSV---AVCLTQAISDWTLAFFLMTISVFF 188

  Fly   250 VIPMILIILLYG--------RMGAKIRSR-TNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVI 305
            |:|.:.:::|||        ...|.:|:| |..:|.::             .:|.|:.||.|||:
  Fly   189 VVPFVTLVVLYGIIARNLVSNRAAMLRARPTKPELSLK-------------ARKQVVLMLGAVVL 240

  Fly   306 TFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAY-----------YVSCTVNPIVYSVM 359
            :||||..||.:..|..:        |..::.|..:....|           |::..:|||:|::|
  Fly   241 SFFVCLLPFRVLTLWII--------LSTDQTLHDLGLVRYYSLLYFCRIMLYLNSAMNPILYNLM 297

  Fly   360 SRRYRVAFRELL--CGKAVGAYYNSGFARDHSSFRESSAYDRVHSVHVRASQHPNKFETDSSSAN 422
            |.::|..|:.|.  .|:.:......|..::                             |||...
  Fly   298 STKFRRGFKRLCQDAGRLLLELVTLGRRKE-----------------------------DSSRGR 333

  Fly   423 RVLIKKTYSLPLPKNAD-----STVLSTTDIVIVLENSHTVCEEPKVENDIWIENEETC 476
            |    .|.||.:..|.:     |.....|...|:..:|:..|.|......:.||.:..|
  Fly   334 R----GTLSLGMGTNTNTNTNSSNATGATSSSILSRSSNRRCSEDISRTRLKIEMQMPC 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CapaR	NP_996140.1	7tmA_capaR	83..367	CDD:320262	88/305 (29%)
		TM helix 2	103..129	CDD:320262	12/25 (48%)
		TM helix 3	142..172	CDD:320262	12/29 (41%)
		TM helix 4	184..206	CDD:320262	6/21 (29%)
		TM helix 5	237..266	CDD:320262	8/36 (22%)
		TM helix 6	291..321	CDD:320262	14/29 (48%)
		TM helix 7	335..360	CDD:320262	7/35 (20%)
ETHR	NP_650960.2	7tmA_ETH-R	11..305	CDD:320128	92/322 (29%)
		TM helix 1	12..38	CDD:320128	12/28 (43%)
		TM helix 2	45..70	CDD:320128	12/25 (48%)
		TM helix 3	85..115	CDD:320128	12/29 (41%)
		TM helix 4	128..149	CDD:320128	6/20 (30%)
		TM helix 5	176..205	CDD:320128	8/28 (29%)
		TM helix 6	226..256	CDD:320128	14/42 (33%)
		TM helix 7	273..298	CDD:320128	5/24 (21%)