DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Olr413

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001000826.1 Gene:Olr413 / 405115 RGDID:1333082 Length:312 Species:Rattus norvegicus


Alignment Length:342 Identity:82/342 - (23%)
Similarity:154/342 - (45%) Gaps:59/342 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EFVAFVLG----PQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAV 112
            ||:  :||    |:...:|.|     :|..:::|.|:||||:.::|...|.:||...::|..||:
  Rat    11 EFI--LLGLPIKPEEQGMYSA-----LFLAMYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAL 68

  Fly   113 SDLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHL 177
            :|:.:....:| ::....|..........|..:.:.....|.:..|.:.:.:.:|::|||||||.
  Rat    69 TDISFSSVTVP-KMLRNMHTQDSSIPYTECIAQMYFFILFTDLDNFLLTSMAYDRYVAICHPLHY 132

  Fly   178 YAMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKI-------- 234
            .|::..:..|.::...||:|.:||:...||  :..|::..|::  ....||.::..:        
  Rat   133 TAIMREELCILLVAMSWILSCVSALSHTLL--LARLSFCADNT--IPHFFCDLAALLKLSCSDIS 193

  Fly   235 VNEIPVFEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRM 299
            :||:.:|... .|...:|:|.|::.||.:||.|...::.| |:.:..:   |..|          
  Rat   194 LNELVIFTAG-TIVITLPLICILISYGHIGATILKVSSNK-GIYKALS---TCGS---------- 243

  Fly   300 LAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYVSCTV-----NPIVYSVM 359
                           ||..:...|...:..||..:.:..|..|....|..||     ||.:||:.
  Rat   244 ---------------HLSVVSLYYGAIIGLYLIPSSSTSSDKGVIASVMYTVVTPLLNPFIYSIR 293

  Fly   360 SRRYRVAFRELLCGKAV 376
            :|..:.|.::|:...|:
  Rat   294 NRDMKEALKKLVNRAAI 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 71/301 (24%)
7tm_1 85..356 CDD:278431 66/283 (23%)
Olr413NP_001000826.1 7tm_4 31..304 CDD:304433 73/307 (24%)
7tm_1 54..290 CDD:278431 60/270 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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