DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CapaR and Ntsr1

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001102437.1 Gene:Ntsr1 / 366274 RGDID:1306076 Length:424 Species:Rattus norvegicus


Alignment Length:439 Identity:122/439 - (27%)
Similarity:205/439 - (46%) Gaps:69/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSST-DPTFSELNAS-FTNTPDTLFATSVSSDPSHGFG---EEDYACGTFNCSPKEFVAFVLGP 60
            :|||. ..|..|.:|. |:.....:.||.::...|:|.|   |.|.|                ||
  Rat     3 LNSSVPQGTPGEPDAQPFSGPQSEMEATFLALSLSNGSGNTSESDTA----------------GP 51

  Fly    61 QT-----LPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRH---SAMHTATNYYLFSLAVSDLLY 117
            .:     ..:|..||:|.|:..:|:.|.|||.:....:.|.   .::.:..:|:|.|||:||||.
  Rat    52 NSDLDVNTDIYSKVLVTAIYLALFVVGTVGNSVTAFTLARKKSLQSLQSTVHYHLGSLALSDLLI 116

  Fly   118 LLFGLPTEVFLY-WHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMV 181
            ||..:|.|::.: |..:|..||...|:...|:.:||||.:...:.:.|:||:||||||.....::
  Rat   117 LLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLM 181

  Fly   182 GFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDH------SRIEESAFCSMSPKIVNEIPV 240
            ...|..:.|:|:|:.|.:.|||......:|..:....|      :.|.::|    :.|:|.::..
  Rat   182 SRSRTKKFISAIWLASALLAIPMLFTMGLQNRSGDGTHPGGLVCTPIVDTA----TVKVVIQVNT 242

  Fly   241 FEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQ------GTNN---RETRNSQMRKKTV 296
            |     :.|:.||::|.:|...:..|:....:|  ..:|      ||:|   ..|.|..:....|
  Rat   243 F-----MSFLFPMLVISILNTVIANKLTVMVHQ--AAEQGRVCTVGTHNGLEHSTFNMTIEPGRV 300

  Fly   297 ------IRMLAAVVITFFVCWFPFHLQRLIFLYA--KNMDNYL-DINEALFSIAGFAYYVSCTVN 352
                  :.:|.||||.|.|||.|:|::||:|.|.  :....:| |.....:.:....:|||..:|
  Rat   301 QALRHGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALFYVSSAIN 365

  Fly   353 PIVYSVMSRRYRVAFRELLCGKAVGAYY----NSGFARDHSSFRESSAY 397
            ||:|:::|..:|..|...|.....|..:    ...|:|..:|...:.|:
  Rat   366 PILYNLVSANFRQVFLSTLACLCPGWRHRRKKRPTFSRKPNSMSSNHAF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 92/316 (29%)
7tm_1 85..356 CDD:278431 87/298 (29%)
Ntsr1NP_001102437.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/19 (37%)
7tm_1 81..369 CDD:278431 87/298 (29%)
Neurotensin binding 326..349 6/22 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..424 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.