DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and or63b2

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_571205.2 Gene:or63b2 / 30357 ZFINID:ZDB-GENE-990415-192 Length:307 Species:Danio rerio


Alignment Length:328 Identity:63/328 - (19%)
Similarity:118/328 - (35%) Gaps:74/328 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLL--YLLFGLPTEVFLYWH 131
            |::.::|..|    :|.||.:..:|.:..::|.....:|.||..:.|.  :.||           
Zfish    27 VVLILLFAAI----IVANLFIIGIIYKEKSLHEPMYVFLCSLCANQLCGSFALF----------- 76

  Fly   132 QYPDLFG-----------MPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKR 185
              |.:.|           :..|..:.|...:...|....:...|.:|::||||||..:.::...|
Zfish    77 --PFVLGNMLRSKTPEVPLTVCHAQIFALYSYAQVEFCNLAMMSYDRYVAICHPLEYHRIMSPAR 139

  Fly   186 AIRIITALWIVS-FISAIPFGLLSDIQYLNYPLDHSRIEESAFCS--MSPKIV-------NEIPV 240
            .:.:|...|.:. .|.:..|.:...:::....||      ..:|.  |..|:.       |.|.:
Zfish   140 TMTLIALGWSLEIMILSFSFSVNVQLKFCGNVLD------KVWCDQYMLVKLACSDTTPNNIIGI 198

  Fly   241 FEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVI 305
            ..:...|  ..|:::|...|.::.......|.||                .:|......|..:.:
Zfish   199 TGIPLAI--GPPLLIIFFSYAKILRVCLKFTRQK----------------AKKSLYTCSLHLITL 245

  Fly   306 TFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYVSC--TVNPIVYSVMSRRYRVAFR 368
            ..|.....|.|.:..|       ..|.| .|:..:....|::.|  .:|||:|.|.....:.|.:
Zfish   246 LNFTVGCSFELIQSRF-------GKLPI-PAVVRVILSLYFLVCPPLINPIMYGVSLTNIKKALK 302

  Fly   369 ELL 371
            :.:
Zfish   303 KCI 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 59/312 (19%)
7tm_1 85..356 CDD:278431 56/295 (19%)
or63b2NP_571205.2 7tm_GPCRs 26..301 CDD:333717 62/322 (19%)
TM helix 1 26..49 CDD:320351 7/25 (28%)
TM helix 2 58..80 CDD:320351 7/34 (21%)
TM helix 3 97..119 CDD:320351 2/21 (10%)
TM helix 4 142..158 CDD:320351 3/15 (20%)
TM helix 5 194..217 CDD:320351 5/24 (21%)
TM helix 6 233..257 CDD:320351 4/23 (17%)
TM helix 7 269..294 CDD:320351 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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