DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and MLNR

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001498.1 Gene:MLNR / 2862 HGNCID:4495 Length:412 Species:Homo sapiens


Alignment Length:412 Identity:121/412 - (29%)
Similarity:190/412 - (46%) Gaps:78/412 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SDPSHGFGEEDY----ACGTFNCSPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVC 90
            ||...|..|..:    .|....|||            .||...|.:|.:...:|:.||.||::..
Human     8 SDGPEGAREPPWPALPPCDERRCSP------------FPLGALVPVTAVCLCLFVVGVSGNVVTV 60

  Fly    91 IVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYV 155
            ::|.|:..|.|.||.||.|:||||||.|| |||.:::..|...|.:||...|::..::.|.|||.
Human    61 MLIGRYRDMRTTTNLYLGSMAVSDLLILL-GLPFDLYRLWRSRPWVFGPLLCRLSLYVGEGCTYA 124

  Fly   156 SVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIITALWIVSFISAIPF---------------- 204
            ::..:.|.|:||:||||.||....:|..:|...:|..||.|:.:||.||                
Human   125 TLLHMTALSVERYLAICRPLRARVLVTRRRVRALIAVLWAVALLSAGPFLFLVGVEQDPGISVVP 189

  Fly   205 GLLSDIQYLNYPLDHS------------------RIEESAF----CSMSPKIVNEIPVFEVSFCI 247
            ||....:..:.||..|                  ..|.:|.    |..||..:..:.|.......
Human   190 GLNGTARIASSPLASSPPLWLSRAPPPSPPSGPETAEAAALFSRECRPSPAQLGALRVMLWVTTA 254

  Fly   248 FFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWF 312
            :|.:|.:.:.:|||.:|.::.|......|  ...:.||..:.|     .:|:|..||:.|.:||.
Human   255 YFFLPFLCLSILYGLIGRELWSSRRPLRG--PAASGRERGHRQ-----TVRVLLVVVLAFIICWL 312

  Fly   313 PFHLQRLIFLYAKN-----MDNYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYR-VAFRELL 371
            |||:.|:|::..::     ...|.:|      :|...:|:|.::|||:|:::|::|| .||:.||
Human   313 PFHVGRIIYINTEDSRMMYFSQYFNI------VALQLFYLSASINPILYNLISKKYRAAAFKLLL 371

  Fly   372 CGKAVGAYYNSGFARDHSSFRE 393
            ..|:    ...||.|...:..|
Human   372 ARKS----RPRGFHRSRDTAGE 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 101/332 (30%)
7tm_1 85..356 CDD:278431 93/313 (30%)
MLNRNP_001498.1 7tm_1 55..355 CDD:278431 93/313 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.020

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