DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Olfr1049

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_667227.2 Gene:Olfr1049 / 259018 MGIID:3030883 Length:308 Species:Mus musculus


Alignment Length:346 Identity:80/346 - (23%)
Similarity:147/346 - (42%) Gaps:75/346 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PKEFVAFVLG-PQT----LPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFS 109
            |.||:  ::| .||    |||: ||.:|     |:...|||||.:.|:....|.:.|...:::..
Mouse     9 PTEFI--LMGVTQTAELKLPLF-AVFLT-----IYAITVVGNLGMIILTKLDSRLQTPMYFFIRH 65

  Fly   110 LAVSDL---------LYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSM 165
            ||..||         :.:.|.:......|:.....:    .|.|...:||    :|:.:.:|:  
Mouse    66 LAFIDLGNSTAICPKMLVNFVVDKNNITYYACATQM----ACFILFIVSE----LSILSSMAY-- 120

  Fly   166 ERFLAICHPLHLYAMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSM 230
            :|::|||:|| ||:.:..:|..:::..   :.::.:|...||..|:|.......:.|....:|.:
Mouse   121 DRYVAICNPL-LYSAIMSQRRCQVLIG---IPYLYSIFQALLFPIRYFTLSFCGANIISHFYCDV 181

  Fly   231 SPKI------VNEIPVFEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNS 289
            .|.:      |.|..:..:.|..|.:|..::::||         |.....|.:.|      .|::
Mouse   182 VPLLPLICSHVEETELLTILFSAFNLISSLVVVLL---------SYMLILLTIFQ------MRSA 231

  Fly   290 QMRKKTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEA---LFSIAGFAYY--VSC 349
            :.|||           .|..|  ..||..::..|...:..|:....|   .:..|...:|  |..
Mouse   232 EGRKK-----------AFSTC--GSHLTVVVVFYGSLLFMYVQPKSAHSFEYDKAASVFYTLVIP 283

  Fly   350 TVNPIVYSVMSRRYRVAFREL 370
            .:||::||:.::..:.||..:
Mouse   284 MLNPLIYSLRNKEVKNAFHRV 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 65/306 (21%)
7tm_1 85..356 CDD:278431 61/290 (21%)
Olfr1049NP_667227.2 7tm_4 31..305 CDD:304433 69/321 (21%)
7tm_1 41..290 CDD:278431 61/290 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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