DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Olfr1184

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_667034.1 Gene:Olfr1184 / 258820 MGIID:3031018 Length:311 Species:Mus musculus


Alignment Length:321 Identity:61/321 - (19%)
Similarity:127/321 - (39%) Gaps:59/321 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFS-LAVSDLLYLLFGLPTEVFLYWHQ 132
            |...:.|...::..:.||||: ::.||.|::.....||..| |:..|:.|.....|..:      
Mouse    23 VFCFLFFSFCYLAILCGNLLI-LISIRCSSLFNQPMYYFLSHLSSMDIFYTSCVTPKLI------ 80

  Fly   133 YPDL------FGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIIT 191
             .||      .....|.::.|.......:.:..:.|.:.:|.:|||.|||...::...|...:|.
Mouse    81 -GDLLVRRKTISYTNCMLQVFAMHFFGMIEILILTAMAFDRCVAICKPLHYMVIMSRSRCHILIW 144

  Fly   192 ALWIVSFISAI-PFGLLSDIQYLN-YPLDHSRIEESAFCSMSPKIVNEIPVFEVSFCIFFV---- 250
            |.|:.....:: .|.||..:.:.. ..:||      .:|.:.|.:  ::...:.:.....|    
Mouse   145 ASWVGGAAHSLSQFCLLICLPFCGPNEIDH------YYCDIFPLL--KVACTDTTITGVLVVANS 201

  Fly   251 --IPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLA--AVVITFFVCW 311
              |.::..::|:|.....:.:..|.              :::.|.|.:....:  .|||.||   
Mouse   202 GLIALVTFVVLFGSYVVILFTLRNY--------------SAEGRHKALSTCASHITVVILFF--- 249

  Fly   312 FPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFRELLC 372
                 ...||.|.:....:.:  :.:|::  |...::...||::|::.:...:.|.:::.|
Mouse   250 -----GPSIFAYLRPPTTFPE--DKIFAL--FYTIIAPMFNPLIYTLRNTEMKKAMKKVWC 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 59/305 (19%)
7tm_1 85..356 CDD:278431 56/287 (20%)
Olfr1184NP_667034.1 7tm_4 29..302 CDD:304433 60/315 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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