DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Olfr116

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_666843.1 Gene:Olfr116 / 258625 MGIID:2177499 Length:321 Species:Mus musculus


Alignment Length:328 Identity:72/328 - (21%)
Similarity:133/328 - (40%) Gaps:72/328 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFLYWHQY 133
            :|..::|...::.|..||.::..:......:.:...|:|..|::.||..|...:|        ||
Mouse    25 ILYALLFLLTYLLGSAGNFIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVP--------QY 81

  Fly   134 PD--LFGMPF-----CKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIIT 191
            .|  |.|..:     |.::.|...|..:..|..:...|.:|::|||.|||...::..::....:|
Mouse    82 VDSSLAGSGYISYGQCMLQIFFFAAFAWGEVAILTVMSYDRYVAICLPLHYEVIMSPRKCTWAVT 146

  Fly   192 ALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKIV-----NE--IPVFEVSF--CI 247
            ::|:.|.|.    |.|......:.....::|....||.: |:::     |:  :.:..|||  .:
Mouse   147 SVWLSSVIP----GTLYIASIFSIRFCRAKIIHQLFCDV-PQLLKLSCSNDHLVVIGMVSFMTAV 206

  Fly   248 FFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVIT--FFVC 310
            .|.. .:.|::.|..:.:                             ||:||.:|...:  |..|
Mouse   207 AFAC-FVGIVISYVHIFS-----------------------------TVLRMPSAESRSKVFSTC 241

  Fly   311 WFPFHLQRLIFLYAKNMDNYLDIN-------EALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFR 368
             .| ||..:....:.....||:.:       |.||||  |...:..|:||::||:.:...:...|
Mouse   242 -LP-HLFVVSLFLSTGSCAYLNTSSDSPTALEFLFSI--FYTVLPPTLNPVIYSLRNETIKSVVR 302

  Fly   369 ELL 371
            :||
Mouse   303 KLL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 69/312 (22%)
7tm_1 85..356 CDD:278431 64/295 (22%)
Olfr116NP_666843.1 7tm_4 41..306 CDD:304433 69/312 (22%)
7tm_1 41..290 CDD:278431 64/295 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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