DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Olfr350

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_666838.1 Gene:Olfr350 / 258620 MGIID:3030184 Length:312 Species:Mus musculus


Alignment Length:333 Identity:75/333 - (22%)
Similarity:158/333 - (47%) Gaps:53/333 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EFVAFVLG----PQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAV 112
            ||:  :||    |:...:|.|:.:|     :::|.|:||||:.::|...|.:||...::|..||.
Mouse    11 EFI--LLGLPIRPEEQGMYYALFLT-----MYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAF 68

  Fly   113 SDLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHL 177
            :|:.:....:| ::....|.:........|..:.:.....|.:..|.:.:.:.:|::|||||||.
Mouse    69 TDISFSSVTVP-KMLRNMHIHDPSIPYAECIAQMYFFILFTDLDNFLLTSMAYDRYVAICHPLHY 132

  Fly   178 YAMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKI-------- 234
            ..::..:..|.::...||:|.:||:...||  :..|::..|::  ....||.::..:        
Mouse   133 TTIMREELCILLVAISWILSCVSALSHTLL--LARLSFCADNT--ISHFFCDLAALLKLSCSDIS 193

  Fly   235 VNEIPVFEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRM 299
            :||:.:|.|...: ..:|:|.|::.||.:.|.|...::.| |:.:..:   |..|.:   :|:.:
Mouse   194 LNELVIFTVGTTV-ITLPLICILISYGHIVATILKVSSNK-GICKALS---TCGSHL---SVVSL 250

  Fly   300 LAAVVI-TFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAY-YVSCTVNPIVYSVMSRR 362
            ....:| .:|:                 ..::...::.:  :|...| .|:..:||.:||:.:|.
Mouse   251 YYGTIIGVYFI-----------------PSSFTSTDKGI--VASVMYTVVTPLLNPFIYSIRNRD 296

  Fly   363 YRVAFREL 370
            .:.|.::|
Mouse   297 MKEALKKL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 65/296 (22%)
7tm_1 85..356 CDD:278431 60/280 (21%)
Olfr350NP_666838.1 7tm_4 31..305 CDD:304433 68/311 (22%)
7tm_1 41..290 CDD:278431 60/280 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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