DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CapaR and Olfr165

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_666677.1 Gene:Olfr165 / 258458 MGIID:3029999 Length:313 Species:Mus musculus


Alignment Length:330 Identity:69/330 - (20%)
Similarity:137/330 - (41%) Gaps:55/330 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 PLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFL 128
            ||:......|:  .||...::||.::.|:|...:.:||.....|..|::.||:.:...:|...|.
Mouse    23 PLHTFFFSLIL--AIFFMALIGNSVMVILIYLDAQLHTPMYILLSQLSLMDLMLISTTVPQTAFN 85

  Fly   129 YWHQYPDLFGMPFCKIRAFISEACTYVSV-----FTIVAFSMERFLAICHPLHLYAMVGFKRAIR 188
            :......: .|..|.::.|.     |||:     |.:.|.:.:|::|||:||....::..|....
Mouse    86 FLSGNKSI-SMAGCGVQIFF-----YVSLLGAECFLLAAMAYDRYVAICYPLRYPILMSHKICSL 144

  Fly   189 IITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKIV----NEIPVFE--VSFC- 246
            :....||:..:.    |::.....|::....:|.....||.: |.::    ::..:||  :.|| 
Mouse   145 MAAFSWILGSLD----GIIDVAAVLSFSYCGTREIPHFFCDI-PALLTISCSDTLIFEKIIFFCC 204

  Fly   247 -IFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVC 310
             |..:.|::::|..|              :.|........:..|:.:..........||:.::  
Mouse   205 VIMLIFPVVIVIASY--------------ICVILAVIKMASAESRHKAFATCSSHVMVVVIYY-- 253

  Fly   311 WFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYVSCT--VNPIVYSVMSRRYRVAFRELL-C 372
                  ...:|:|.:...:.....:.|.|    |:|...|  :||::||:.::....||.::| .
Mouse   254 ------GAAMFIYMQPSSSRSPNQDKLVS----AFYTILTPLLNPLIYSLRNKEVARAFMKVLRM 308

  Fly   373 GKAVG 377
            .||.|
Mouse   309 DKAAG 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 61/304 (20%)
7tm_1 85..356 CDD:278431 56/285 (20%)
Olfr165NP_666677.1 TM helix 7 270..295 CDD:320543 9/28 (32%)
7tmA_OR2T-like 26..302 CDD:320543 61/314 (19%)
TM helix 1 27..53 CDD:320543 7/27 (26%)
TM helix 2 60..86 CDD:320543 6/25 (24%)
TM helix 3 98..128 CDD:320543 9/34 (26%)
TM helix 4 141..162 CDD:320543 3/24 (13%)
TM helix 5 196..226 CDD:320543 9/43 (21%)
TM helix 6 233..263 CDD:320543 5/37 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.