DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Olfr1182

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001011535.1 Gene:Olfr1182 / 258167 MGIID:3031370 Length:305 Species:Mus musculus


Alignment Length:324 Identity:63/324 - (19%)
Similarity:126/324 - (38%) Gaps:85/324 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 FITGVVGNLLVCIVIIRHSAMHTATNYYLFS-LAVSDLLY-------LLFGLPTEVFLYWHQYPD 135
            :.|.:..|||: :..||.|::.....||..| ||..|:.|       |:..|..|....  .|.|
Mouse    33 YFTILSWNLLI-LFSIRCSSLFNQPMYYFLSHLASMDICYTSCVTPKLIGDLLAERKTI--SYTD 94

  Fly   136 LFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIITALWI----- 195
                  |.::.|.......:....:...:.:|.:|||.|||...::...|....|.|.|:     
Mouse    95 ------CMLQVFAMHFFGMIETLILTVMAFDRCVAICKPLHYMVIMSRNRCHVFIWASWVGGVAH 153

  Fly   196 ----VSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKIVNEIPVFEVSFCIFFVIPMILI 256
                |..:..:||...::|       ||      .||.:       .|:.:::....::|.::::
Mouse   154 SFPQVMMLVCLPFCGPNEI-------DH------YFCDV-------FPLLKIACTDTYIIGVLMV 198

  Fly   257 -----------ILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLA--AVVITFF 308
                       :||:|.....:.:..|.              :::.|:|.:....:  :|||.||
Mouse   199 ANSGMVASVIFVLLFGSYVVILFTLRNY--------------SAEGRRKALSTCGSHISVVILFF 249

  Fly   309 VCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFRELLC 372
                    ...||.|.:....:.:  :.:|::  |...::...||::|::.::..:.|.:::.|
Mouse   250 --------GSTIFAYLRPPTTFPE--DKIFAL--FYTIIAPMFNPLIYTLRNKEMKTAIKKVWC 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 62/318 (19%)
7tm_1 85..356 CDD:278431 59/300 (20%)
Olfr1182NP_001011535.1 7tm_4 29..302 CDD:304433 63/324 (19%)
7tm_1 39..285 CDD:278431 59/300 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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