DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and srw-103

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_503489.2 Gene:srw-103 / 191411 WormBaseID:WBGene00005850 Length:368 Species:Caenorhabditis elegans


Alignment Length:343 Identity:70/343 - (20%)
Similarity:132/343 - (38%) Gaps:85/343 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 ITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVF-------------LYWH 131
            :..|:.||....::.|.|...:|||..|..|::||:..::..:...:|             |.|.
 Worm    34 LISVLVNLAHITILCRKSMRTSATNVILIGLSISDMCIVMTTVYKHLFMIDFENSDCMTSSLRWK 98

  Fly   132 QYPDLFGMPFCKIRAFISEACTYVSV------FTIV-AFSMERFLAICHPLHLYAMVGFKRAIRI 189
            .|.|   |....|:.......:::.|      |.|| ..:..||.....|...:.|:   ..:..
 Worm    99 IYVD---MTVWSIQIHFRRCVSWLGVLMATVRFVIVKKMTTSRFGNWSKPKVGWYMI---LVVSC 157

  Fly   190 ITAL--------WIVSFISAIPFGLLSDIQYLNYPLDHSRIEES----------------AFCSM 230
            |:||        |:|....:||.    .:....|.....|::.|                ::.::
 Worm   158 ISALQTAFYQSRWMVVENRSIPL----PVNCALYQKISRRVQFSVMLNDFFNSDDQFVLRSYLTV 218

  Fly   231 SPKIVNEIPVFEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKT 295
            ...:...||      |:.|.|  :.::||:.....|   ::.:.:|.:.|:.|.:      :|..
 Worm   219 DAVVTKFIP------CVAFSI--LTVLLLHALQKLK---KSGESIGRKTGSTNED------KKDL 266

  Fly   296 VIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAG-FAYYVS--CTVNPIVYS 357
            ..:::..:.|:|.:...|.   .:|:|.....|.    |:|:..::. |..|.|  .|||.|::.
 Worm   267 STKLIIFMTISFLIIEAPL---GVIYLVKACYDR----NDAISILSSDFVVYFSMLVTVNSIIHP 324

  Fly   358 V----MSRRYRVAFRELL 371
            :    ||.:||...|::|
 Worm   325 IFCILMSSQYRDTIRKML 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 69/338 (20%)
7tm_1 85..356 CDD:278431 63/317 (20%)
srw-103NP_503489.2 7TM_GPCR_Srw 28..345 CDD:370978 70/343 (20%)
TM helix 1 30..49 CDD:320109 3/14 (21%)
TM helix 2 58..82 CDD:320109 5/23 (22%)
TM helix 3 103..125 CDD:320109 3/21 (14%)
TM helix 4 150..169 CDD:320109 4/21 (19%)
TM helix 5 213..236 CDD:320109 5/30 (17%)
TM helix 6 265..290 CDD:320109 4/27 (15%)
TM helix 7 306..331 CDD:320109 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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