DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and srw-77

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_507211.1 Gene:srw-77 / 189258 WormBaseID:WBGene00005824 Length:349 Species:Caenorhabditis elegans


Alignment Length:335 Identity:74/335 - (22%)
Similarity:128/335 - (38%) Gaps:80/335 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 FITGVVGNLLV---CIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFLYWHQYPDLFGMP 140
            |:..:||.:|.   .:::.|.|...::||..:..:|:.||:.||..:...|:.:|     ::..|
 Worm    21 FVIAIVGFILTIPHLLILTRKSMRSSSTNSIMTGIAILDLVVLLEVVLEHVYYFW-----IYDNP 80

  Fly   141 FCKIRAFISEACTYVSVF-----TIVAFSMERFLAICHPLHLYAMVGFKRAIRII-----TALWI 195
            ......:..|...::..|     ...:|.|..||.:...|    :..||.|.|:.     .|::.
 Worm    81 CINHSNYNFELFLWIGDFLKDTGERASFWMGVFLVLIRLL----ITKFKTAQRLSGYFFGYAVFT 141

  Fly   196 VSFISAIPFGLLSDIQYLNYPLDHSRI--EESAFCSMSPKIVNE-------------IPVFEVSF 245
            ::||..:   |:|...|..:.|....:  :....||..||..:|             :.||. ::
 Worm   142 LTFIINV---LISYYFYSKFYLQAWMVPWQPGKRCSEFPKGYSENLYVRTIQDQASYMAVFG-NY 202

  Fly   246 CIFFVIPMILIILLYG----------RMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRML 300
            .|...:..|||.:||.          |..||..|..|.|...::..:..             ||:
 Worm   203 SIIGGMSKILISVLYPVLAVFLIFDIRKSAKHASTANSKKAAKERYHTG-------------RMI 254

  Fly   301 AAVVITFFVCWFPFHLQRLIFLYAKNMD--------NYLDI-NEALFSIAGFAYYVSCTVNPIVY 356
            ..:.:.:.:...|..:.:.|.||.|..|        .|..| ..|||.:...::   |.:|   :
 Worm   255 LLMAVLYTITSAPGGISKFITLYCKVPDGSILMLLIGYGSIFLSALFCLNSASH---CLIN---F 313

  Fly   357 SVMSRRYRVA 366
            | ||..||.|
 Worm   314 S-MSTNYRKA 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 72/329 (22%)
7tm_1 85..356 CDD:278431 66/317 (21%)
srw-77NP_507211.1 7TM_GPCR_Srw 18..328 CDD:287314 74/335 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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