Protein Alignment CapaR and srw-112

DIOPT Version :9

• Sequence 1: NP_996140.1
• Gene: CapaR / 40393
• FlyBaseID: FBgn0037100
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_503820.2
• Gene: srw-112 / 187330
• WormBaseID: WBGene00005859
• Length: 375
• Species: Caenorhabditis elegans
• Alignment Length: 377
• Identity: 66/377 - (17%)
• Similarity: 145/377 - (38%)
• Gaps: 93/377 - (24%)

  Fly    43 CGTFNCSPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYL 107
            |...|    :||.||........|...|:.:|           ||...||:.|.|...::.|..:
 Worm    23 CSFLN----DFVNFVDVVNKHKFYIYYLVVLI-----------NLFHVIVLTRPSMRTSSINIIM 72

  Fly   108 FSLAVSDLLYLLFGLPTEVFL------------YWHQYPDLFGMPFCKIRAFISEACTYVSVFTI 160
            .::|::|::..::.:..::.|            .:|....|....:| ::.:.....|::|
 Worm    73 TAVAIADIISAIYNIHLKIVLILTDIYPCYSKNLYHNLIILDNCLYC-LQDYTRRCSTWLS---- 132

  Fly   161 VAFSMERFLAICHPLHLYAMVGFKRAIRIITALWIVSFISA--IPFGLLSDIQYL---------- 213
            ::.:..|.|.:.:|:.    ..:::.....||:.::..|.:  :|..:|   ||.
 Worm   133 LSIATIRTLVVRNPMD----PKYEKLSNPKTAVIVIFTICSLCLPTTVL---QYFKAGFIENEEA 190

  Fly   214 NYPLDHSRIEESAFCSMSPKIV-NEIPVFEVSF-----------CIFFVIPMILIILLYGRMGAK 266
            |....:..::|..:..:|...: ||:.::.:.|           |:.:.|..:.:|:.. |..|.
 Worm   191 NACKGNEMVDEYYYRGLSDLFMDNEMLIYNIFFYLEGVTSKLIPCLLYPIATVFLIIEI-RKAAI 254

  Fly   267 IRSRTNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKN----- 326
            .|.:.:.....||.::.|.|           :::..:.:.|::..||     :...|..|
 Worm   255 NRKKISSSSSSQQDSSGRTT-----------KLIFYLTVIFYIGEFP-----MAVFYILNPILQM 303

  Fly   327 -----MDNYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFRELLCG 373
                 ...||...|.|||....|   :..::..:..:||.:|::..::::.|
 Worm   304 SIQWGFYTYLVYFEFLFSTLLTA---TTAIHMPICLLMSSQYKITAKDVIFG 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CapaR	NP_996140.1	7tm_4	85..374	CDD:304433	57/335 (17%)
		7tm_1	85..356	CDD:278431	53/316 (17%)
srw-112	NP_503820.2	7TM_GPCR_Srw	38..353	CDD:370978	60/358 (17%)
		TM helix 2	69..91	CDD:320109	3/21 (14%)
		TM helix 3	115..137	CDD:320109	3/26 (12%)
		TM helix 4	162..178	CDD:320109	3/18 (17%)
		TM helix 5	220..243	CDD:320109	3/22 (14%)
		TM helix 6	271..296	CDD:320109	5/40 (13%)
		TM helix 7	311..339	CDD:320109	7/30 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910