Protein Alignment CapaR and srw-61

DIOPT Version :9

• Sequence 1: NP_996140.1
• Gene: CapaR / 40393
• FlyBaseID: FBgn0037100
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001255885.1
• Gene: srw-61 / 186783
• WormBaseID: WBGene00005808
• Length: 395
• Species: Caenorhabditis elegans
• Alignment Length: 431
• Identity: 77/431 - (17%)
• Similarity: 155/431 - (35%)
• Gaps: 138/431 - (32%)

  Fly     6 DPTFSELNASFTNTPDTL-------FATSVSSDPSHGFGEEDYACGTFNCSPKEFVAFVLGPQTL 63
            |.|::.:...:.:.||..       |.|.:::..|      .|.| .|:||
 Worm     2 DFTYNAIYYDYDSHPDNAELKSFSDFLTKINNFSS------KYQC-VFSCS-------------- 45

  Fly    64 PLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFL 128
                              |::.||:..|:|.|.|....:....:..:.:|| ||.:|.: ..|||
 Worm    46 ------------------GLLINLVHLIIITRKSLRVNSVYVIMIGITLSD-LYTMFHV-VYVFL 90

  Fly   129 -------YW-----------------HQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFL 169
                   .|                 :||.....:....|.:.:.||...:|.:.....::.|:|
 Worm    91 DNIVSNYNWYECFQVCTEQECFKFHKYQYHGYLHVVVELIMSALREALRRLSTWLAFCMALFRWL 155

  Fly   170 AICHPLHL------YAMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAF- 227
            .|.:.::.      .....||..:.::....|::|:|   ||            .|: :.::.|
 Worm   156 IIRNSMNAKFDFLSRPSFAFKTVLTLLLISPIITFLS---FG------------QHT-VTDNGFV 204

  Fly   228 ----CSMSPK-------IVNEIPVFE----VSFCIFF-------VIPMILIILLYGRMGAKIRSR 270
                ||..|.       |:.:..||:    ::..::|       :||.:.:..|...:...:|:.
 Worm   205 DVSQCSGIPDYIVPHTYIIKKGRVFDDFWPLAVQLYFFSDGISKIIPAVCLPFLCIVLVTCLRTA 269

  Fly   271 TNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDIN- 334
            ...:..:.:.::|.:        :|:  .:..::..|.|  |......:.:|: |.:  |.|.|
 Worm   270 RESRKNLSKSSSNND--------RTI--YMVTIMTAFSV--FAEGPSGISYLF-KAL--YYDHNA 319

  Fly   335 -----EALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFREL 370
                 :.|..|...|..::..|:.|:..|:|.:||...::|
 Worm   320 IKSALQTLDEILINAAILNSIVHVIISLVVSTQYRETAKKL 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CapaR	NP_996140.1	7tm_4	85..374	CDD:304433	64/345 (19%)
		7tm_1	85..356	CDD:278431	59/329 (18%)
srw-61	NP_001255885.1	7TM_GPCR_Srw	37..364	CDD:370978	70/390 (18%)
		TM helix 2	67..91	CDD:341315	7/25 (28%)
		TM helix 3	128..158	CDD:341315	6/29 (21%)
		TM helix 4	172..192	CDD:341315	4/19 (21%)
		TM helix 5	237..261	CDD:341315	4/23 (17%)
		TM helix 6	281..311	CDD:341315	6/42 (14%)
		TM helix 7	322..350	CDD:341315	6/27 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910