Protein Alignment CapaR and dmsr-1

DIOPT Version :9

• Sequence 1: NP_996140.1
• Gene: CapaR / 40393
• FlyBaseID: FBgn0037100
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_741629.1
• Gene: dmsr-1 / 186437
• WormBaseID: WBGene00010191
• Length: 510
• Species: Caenorhabditis elegans
• Alignment Length: 518
• Identity: 99/518 - (19%)
• Similarity: 170/518 - (32%)
• Gaps: 190/518 - (36%)

  Fly     9 FSELNASFTNTPDTLFATSVSSDPSHGFGEEDYACGTFNCSPKEFVAFVLGPQTLPLYKAVLITI 73
            |:|...:|.:.||..|...|                        ||:.......:..|.::.:.:
 Worm     3 FTECKTTFIHLPDKSFLYDV------------------------FVSVYNFYHPIHAYLSIFLCV 43

  Fly    74 IFGGIFITGVVGNLLVC-IVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFLYWHQYPDLF 137
            :       |.:.|.  | ||::....|.|..|..|.::|..|.:.|...|
 Worm    44 L-------GTIANF--CNIVVLTRRTMRTPVNMILTAMASCDTVVLFSNL--------------- 84

  Fly   138 GMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLH------LY-------AMVGFKRAIRI 189
                           .|.:.::.|||.      .|||.|      |:       ::|....::.:
 Worm    85 ---------------IYTTHYSFVAFK------FCHPKHWSYSWALFLIAHAHLSLVAHSSSVWL 128

  Fly   190 ITALWIVSFISAIPFGLLSDIQ------------------------YLNYPLDHSRIEESAFCS- 229
            ...|.:|.:::....|.:..:|                        :|||.::...:.|:  |:
 Worm   129 SVMLALVRYVTLRSRGNMGGMQVTLRHSYYAVAVTVSLVAVLNAPNFLNYKINEQPLNET--CTD 191

  Fly   230 MSPKIVNE---IP------------VFEVSF----CIFFVIPMILIIL---LYGRMGAKIR---- 268
            :.|...|.   :|            ||.:|:    .:|.|:|..|:.|   |..|:..::|
 Worm   192 LDPMFWNSPAYLPGIADIAKANSCLVFRLSYWISGMVFKVLPCALLSLFVWLLLRILREVRENRQ 256

  Fly   269 ---------------SRTNQKLGVQQGTNNRETRNSQMRKK-----TVIRMLAAVVITFFVCWFP 313
                           :|..|:|.:....|.:..||..:|.:     ....||.|:|....|...|
 Worm   257 RLLKNSQHRPPNQTTTRNGQRLSISVAGNEKLGRNGSLRGRGERVDRTTHMLLAIVAVMLVTELP 321

  Fly   314 FHLQRL----------IFLYAKNMDNYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFR 368
            ..:..:          |::| .|:.:.||    |||:.|     || .:.|:|..||.::|..|.
 Worm   322 QGIMAVLSGMCSEEFRIYIY-NNLGDILD----LFSLCG-----SC-CSFIIYCSMSGQFRNEFH 375

  Fly   369 ELLCGKAVGAYYNSGFARDHSSFRESSAYDRVHSVHVRASQHPNKFETDSSSANRVLIKKTYS 431
            .:.....|.....|    ..|..|.|.||.......::    ||:...:..:.|     .|||
 Worm   376 RVFVPAKVRCLRMS----SPSIRRPSDAYSTTKMTFLK----PNEKNGNGMNGN-----GTYS 425

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CapaR	NP_996140.1	7tm_4	85..374	CDD:304433	75/383 (20%)
		7tm_1	85..356	CDD:278431	70/365 (19%)
dmsr-1	NP_741629.1	7tmA_FMRFamide_R-like	32..374	CDD:410630	76/399 (19%)
		TM helix 1	34..58	CDD:410630	6/32 (19%)
		TM helix 2	66..88	CDD:410630	7/51 (14%)
		TM helix 3	112..134	CDD:410630	2/21 (10%)
		TM helix 4	158..174	CDD:410630	0/15 (0%)
		TM helix 5	219..242	CDD:410630	6/22 (27%)
		TM helix 6	305..327	CDD:410630	6/21 (29%)
		TM helix 7	342..367	CDD:410630	11/34 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910