Protein Alignment CapaR and nmur-1

DIOPT Version :10

• Sequence 1: NP_996140.1
• Gene: CapaR / 40393
• FlyBaseID: FBgn0037100
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_509515.3
• Gene: nmur-1 / 183574
• WormBaseID: WBGene00016747
• Length: 400
• Species: Caenorhabditis elegans
• Alignment Length: 394
• Identity: 137/394 - (34%)
• Similarity: 210/394 - (53%)
• Gaps: 51/394 - (12%)

  Fly    38 EEDYACGTFNC--------SPKE-------FVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNL 87
            |:...|..|||        |.||       |:: ......:.|||   :|.::..||:.||:||.
 Worm    10 EDQCDCLAFNCPIVYSHSESEKEACYMEHCFIS-KRALDDVTLYK---VTALYIFIFLVGVIGNT 70

  Fly    88 LVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEAC 152
            ..|:|:.:|..|.|..:.||.:||||||:.|..|||.||.:.|:|||..|....|.::|.|:|..
 Worm    71 TTCLVMKKHPMMKTHASMYLMNLAVSDLVTLCVGLPFEVMMNWNQYPWPFPDYICNLKALIAETT 135

  Fly   153 TYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAI-RIITALWIVSFISAIPFGLLSDIQYL--N 214
            :.||:.||:.|::||::|:||||.|..:..|||.| .||...||.|.:.|:||.:.....|:  :
 Worm   136 SSVSILTILIFAIERYVAVCHPLFLMKVQPFKRNIGTIIGFTWIFSILCAMPFAIHHRADYIMKS 200

  Fly   215 YPLDHSRI--EESAFCSMS----PKIVNEIPV-FEVSFCIFFVIPMILIILLYGRMGAKIRS-RT 271
            :|...:||  :.|..|.::    ||:.:...: |..|...||.:|:..|::||.|:..|:.| ||
 Worm   201 WPGTDNRIPVKSSKMCMIAVMFEPKLASTFKILFHFSAIAFFALPLFTIVILYARIACKVSSNRT 265

  Fly   272 NQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEA 336
                 :|.|..: .|...|||   :..:|.|:|..||:|:.||.||||:|.|..|......:|:.
 Worm   266 -----IQPGELD-ITEELQMR---INAILCAIVSAFFICYLPFQLQRLLFFYFDNEVILTWVNQY 321

  Fly   337 LFSIAGFAYYVSCTVNPIVYSVMSRRYRVAFRELL---CGKAVGAYYNSGFARDHSSFRESSAYD 398
            ::.|:||.:|::..:|||.|::.|.|:|.||:::|   |.:.....|      ..|||   |.|.
 Worm   322 MYFISGFLFYLATIINPIAYNLASSRFRRAFKDILIDYCWRGGSERY------PRSSF---SKYS 377

  Fly   399 RVHS 402
            ..|:
 Worm   378 LAHT 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CapaR	NP_996140.1	7tmA_capaR	83..367	CDD:320262	110/294 (37%)
		TM helix 2	103..129	CDD:320262	14/25 (56%)
		TM helix 3	142..172	CDD:320262	12/29 (41%)
		TM helix 4	184..206	CDD:320262	11/22 (50%)
		TM helix 5	237..266	CDD:320262	9/29 (31%)
		TM helix 6	291..321	CDD:320262	14/29 (48%)
		TM helix 7	335..360	CDD:320262	8/24 (33%)
nmur-1	NP_509515.3	7tmA_NTSR-like	52..352	CDD:320110	116/311 (37%)
		TM helix 1	52..79	CDD:320110	11/29 (38%)
		TM helix 2	86..112	CDD:320110	14/25 (56%)
		TM helix 3	125..155	CDD:320110	12/29 (41%)
		TM helix 4	168..190	CDD:320110	10/21 (48%)
		TM helix 5	230..259	CDD:320110	9/28 (32%)
		TM helix 6	276..306	CDD:320110	15/32 (47%)
		TM helix 7	320..345	CDD:320110	8/24 (33%)