DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and Ntsr2

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_032773.2 Gene:Ntsr2 / 18217 MGIID:108018 Length:416 Species:Mus musculus


Alignment Length:362 Identity:100/362 - (27%)
Similarity:172/362 - (47%) Gaps:50/362 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTA-TNYYLFSLAVSDLLYLLFG 121
            ||..| .|:..||.|.::..||..|..||.|...|:::..|.... ..|::.|||:|.||.||..
Mouse    23 LGVDT-RLWAKVLFTALYSLIFALGTAGNALSVHVVLKARAGRPGRLRYHVLSLALSALLLLLIS 86

  Fly   122 LPTEVFLY-WHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKR 185
            :|.|::.: |..||.:||...|:...|:.|.|.|.:|.::.:.|.||.||:|.||....::..:|
Mouse    87 VPMELYNFVWSHYPWVFGDLGCRGYYFVRELCAYATVLSVASLSAERCLAVCQPLRARRLLTPRR 151

  Fly   186 AIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKIVNE--IPVF-EVSFCI 247
            ..|:::.:|:.|...|:|..::...::.....|......|..|::   :|:.  :.|| :|:..:
Mouse   152 TRRLLSLVWVASLGLALPMAVIMGQKHEMERADGEPEPASRVCTV---LVSRATLQVFIQVNVLV 213

  Fly   248 FFVIPMIL-----------IILLYGRM---GAKIRS-------------------RTNQKLGVQQ 279
            .||:|:.|           ::.||.::   .|::.|                   |....||| |
Mouse   214 SFVLPLALTAFLNGITVNHLVALYSQVPSASAQVNSIPSRLELLSEEGLLGFITWRKTLSLGV-Q 277

  Fly   280 GTNNRETRNSQMRK-KTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKN---MDNYLDINEALFSI 340
            .:..|....||:|. :...::|.|:|..:.:||.|:|.:||::.|..:   .|...|.....:.:
Mouse   278 ASLVRHKDASQIRSLQHSAQVLRAIVAVYVICWLPYHARRLMYCYIPDDGWTDELYDFYHYFYMV 342

  Fly   341 AGFAYYVSCTVNPIVYSVMSRRYRVAFRE---LLCGK 374
            ....:|||..|.|::|:.:|..:|..|.|   .|||:
Mouse   343 TNTLFYVSSAVTPVLYNAVSSSFRKLFLESLSSLCGE 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 89/333 (27%)
7tm_1 85..356 CDD:278431 82/312 (26%)
Ntsr2NP_032773.2 7tm_1 85..358 CDD:278431 68/276 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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