Protein Alignment CapaR and nmur-2

DIOPT Version :10

• Sequence 1: NP_996140.1
• Gene: CapaR / 40393
• FlyBaseID: FBgn0037100
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_493666.2
• Gene: nmur-2 / 173398
• WormBaseID: WBGene00019616
• Length: 403
• Species: Caenorhabditis elegans
• Alignment Length: 396
• Identity: 135/396 - (34%)
• Similarity: 198/396 - (50%)
• Gaps: 46/396 - (11%)

  Fly    52 EFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLL 116
            |:|...||.:.......:...||:|.||:.|:.||:..||||..:.:||..||||||||||||::
 Worm    15 EYVLSTLGERCQSAGIVIPTVIIYGTIFLLGLFGNICTCIVIAANKSMHNPTNYYLFSLAVSDII 79

  Fly   117 YLLFGLPTEVFLYW-HQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAM 180
            .|:.|||.|.:... :.||..|....||.|||:.|..:|.|:..|..||.||:|||||||.....
 Worm    80 ALILGLPMEFYQSLDYSYPYRFSEGICKARAFLIEFTSYASIMIICCFSFERWLAICHPLRSKIF 144

  Fly   181 VGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSR-------------IEESAFCSMS- 231
            ....||..:|...|.:||:.|:|...:..|..|..|.|...             :..:.||:|:
 Worm   145 STLWRANVLIILAWTISFVCALPIAFIVQINKLPLPEDAKYQPWTNKVSTDGIFVLHTEFCAMNQ 209

  Fly   232 --PKIVNEIPVFEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETRNSQMRKK 294
              |.....|.:|  :|.:|||||.|.|:::|..:..::.|......|.:.....|...|     :
 Worm   210 SRPDQQKMIIIF--AFTVFFVIPAIAIVIMYAHIAVQLESSEIDLKGDKMVKKRRNKSN-----R 267

  Fly   295 TVIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMD--------NYLDINEALFSIAGFAYYVSCTV 351
            ||::||.:||||||:||.|||:|||:.:|....:        .:|.:  .:|.|:||.||.:...
 Worm   268 TVLKMLLSVVITFFICWLPFHIQRLLSVYTTWSETTTISPPVQFLSM--IVFYISGFCYYSNSAA 330

  Fly   352 NPIVYSVMSRRYRVAFRELLCGKAVGAYYNSGFARDHSSFRESSAYD------------RVHSVH 404
            |||:|:::|::||.||...:.|..:..:...|..|...|.|.||:.:            ||...|
 Worm   331 NPILYNILSQKYRSAFCRTILGDHIANFVFKGHQRPGQSKRCSSSTEAEQRTLMTRGSVRVDKPH 395

  Fly   405 VRASQH 410
            .:...|
 Worm   396 RKLEVH 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CapaR	NP_996140.1	7tmA_capaR	83..367	CDD:320262	112/308 (36%)
		TM helix 2	103..129	CDD:320262	17/25 (68%)
		TM helix 3	142..172	CDD:320262	15/29 (52%)
		TM helix 4	184..206	CDD:320262	8/21 (38%)
		TM helix 5	237..266	CDD:320262	11/28 (39%)
		TM helix 6	291..321	CDD:320262	18/29 (62%)
		TM helix 7	335..360	CDD:320262	10/24 (42%)
nmur-2	NP_493666.2	7tmA_capaR	32..346	CDD:320262	118/322 (37%)
		TM helix 1	32..59	CDD:320262	12/26 (46%)
		TM helix 2	66..92	CDD:320262	17/25 (68%)
		TM helix 3	106..136	CDD:320262	15/29 (52%)
		TM helix 4	148..170	CDD:320262	8/21 (38%)
		TM helix 5	215..244	CDD:320262	11/30 (37%)
		TM helix 6	264..294	CDD:320262	19/34 (56%)
		TM helix 7	314..339	CDD:320262	10/26 (38%)