DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and LOC101732366

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_004918724.1 Gene:LOC101732366 / 101732366 -ID:- Length:373 Species:Xenopus tropicalis


Alignment Length:322 Identity:81/322 - (25%)
Similarity:155/322 - (48%) Gaps:24/322 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LPLYKAVLITIIFGGIFITGVVGNLLVCIVI--IRHSAMHTATNYYLFSLAVSDLLYLLFGLPTE 125
            |.:|....|::.:..:...|::||.:|..|:  :|...:..:.::::.|||..|||.|:.|:|.|
 Frog    21 LSIYAKSSISLTYMLLLFAGILGNAMVIRVLWGLRRRRVQASLSHHMCSLASCDLLQLVLGIPAE 85

  Fly   126 VF-LYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRI 189
            :: ..|..:|...|...|....::.|...|.::|.:::.|.||.||.|.||.|:..   :.::|:
 Frog    86 LYGSIWSPFPWPLGNIGCCGFYYLWEVLCYAAIFNVLSLSCERHLATCRPLSLHLR---QSSVRL 147

  Fly   190 -ITALWIVSFISAIP--FGL-LSDIQYLNYPLDHSRIEESAFCS-MSPKIVNEIPVFEVSFCIFF 249
             :..:|::|.::.:|  |.: |.|:...:....|:   |...|: :|.:....:.....||..:.
 Frog   148 RLCFIWLMSLLAGLPVLFTMGLEDVYAADVDDQHT---ELWVCTPLSSRKGLFVATIWASFLTYL 209

  Fly   250 VIPMILIILLYGRMGAKIRSRTNQKL------GVQQGTNNRETRNSQMRKKTVIRMLAAVVITFF 308
            .:..::.|..: ||...::...:|.:      |..|......:..:...:|...|||..:|....
 Frog   210 GVLSVVGITCW-RMRRALQGSASQDVEVAGPGGSVQLLGRFCSGQTVTARKQNARMLGCIVGALA 273

  Fly   309 VCWFPFHLQRLI-FLYAKNM--DNYLDINEALFSIAGFAYYVSCTVNPIVYSVMSRRYRVAF 367
            |||.||..:||: .|.:|:.  :||......|..|....||:|..:.|::|::.|:.:|.||
 Frog   274 VCWLPFQARRLMTVLRSKDQWTENYYRSYITLQPITNCFYYLSSCLTPLLYNLTSQSFRRAF 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 77/300 (26%)
7tm_1 85..356 CDD:278431 72/287 (25%)
LOC101732366XP_004918724.1 7tm_GPCRs 27..335 CDD:391938 77/314 (25%)
TM helix 1 29..53 CDD:341315 6/23 (26%)
TM helix 2 64..86 CDD:341315 9/21 (43%)
TM helix 3 104..126 CDD:341315 3/21 (14%)
TM helix 4 147..163 CDD:341315 2/15 (13%)
TM helix 5 194..217 CDD:341315 2/22 (9%)
TM helix 6 259..284 CDD:341315 10/24 (42%)
TM helix 7 303..328 CDD:341315 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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