DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and ntsr2

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_017949971.1 Gene:ntsr2 / 101730337 XenbaseID:XB-GENE-22068810 Length:430 Species:Xenopus tropicalis


Alignment Length:371 Identity:100/371 - (26%)
Similarity:169/371 - (45%) Gaps:73/371 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGNLLVCIVII----RHSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFLY 129
            |.||:.:..||:.|.:||:|...:::    ||....| .:|:|.|:|:||:|.||..:|.|::.:
 Frog    37 VFITVFYILIFLVGTIGNVLTIRLVLKKHNRHKLQGT-VHYHLVSMALSDILILLISIPIELYNF 100

  Fly   130 -WHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFKRAIRIITAL 193
             |..||.:||...|:...|:.:.|:|.:|..|.:.|.||:||||||:....::...|..:|::.:
 Frog   101 IWVHYPWIFGDAVCRSYYFLRDICSYATVLNITSLSCERYLAICHPMTAKRIMSKMRTKKILSVI 165

  Fly   194 WIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFC-----SMSPKIVNEIPVFEVSFCIFFVIPM 253
            |..|.:.|:|...:..::|.|...:......|..|     :.:.|:..::.||     :.|::|:
 Frog   166 WFSSVVFAMPMAFIMGVKYENTTPEGEEDPSSLICTNLVSTATLKVFIQVNVF-----VSFLLPL 225

  Fly   254 ILIIL-----------LYGRMGAKIRSRTN---------------------QKLGVQQGTNNRET 286
            .||..           |..|....:.|.:.                     :||.| .|..::.:
 Frog   226 ALISCLNCVTVNQLESLRSRYFLSLHSSSKAPQASYRAHVSLKPVSSSPAVKKLSV-AGATSKSS 289

  Fly   287 RNSQMRKKTV------IRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNY-----LDINEALFSI 340
            .........:      |.||.|:||.:.|||.|:|.:||:|.|..  |:|     .......:.:
 Frog   290 LTVSCEPNRIQPIQHSIYMLRAIVIAYVVCWLPYHARRLMFCYIP--DDYWTGFLYTFYHYFYML 352

  Fly   341 AGFAYYVSCTVNPIVYSVMSRRYRVAFRELLCGKAVGAYYNSGFAR 386
            ....:|||..||||:|:::|..:|..|.|.|           ||:|
 Frog   353 TNTLFYVSSAVNPILYNMVSSSFRELFLETL-----------GFSR 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 91/341 (27%)
7tm_1 85..356 CDD:278431 85/323 (26%)
ntsr2XP_017949971.1 7tm_GPCRs 36..379 CDD:391938 94/350 (27%)
TM helix 1 38..63 CDD:341315 8/24 (33%)
TM helix 2 75..97 CDD:341315 10/21 (48%)
TM helix 3 115..137 CDD:341315 5/21 (24%)
TM helix 4 160..176 CDD:341315 4/15 (27%)
TM helix 5 210..233 CDD:341315 7/27 (26%)
TM helix 6 303..328 CDD:341315 11/24 (46%)
TM helix 7 347..372 CDD:341315 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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