DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and mlnr

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_003200046.1 Gene:mlnr / 100536406 ZFINID:ZDB-GENE-130530-1015 Length:345 Species:Danio rerio


Alignment Length:352 Identity:101/352 - (28%)
Similarity:165/352 - (46%) Gaps:65/352 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EDYACGTFNCSPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTAT 103
            ||:.||.               ...|....:.:|.|...:||.||.||.:..::|.|...|.|.|
Zfish     2 EDHHCGA---------------SLFPTSTLIPVTTICIFLFIIGVTGNTMTILIIQRFKDMKTTT 51

  Fly   104 NYYLFSLAVSDLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTIVAFSMERF 168
            |.||.|:|:|||:..| .||.:::..|...|.:||...|::..:|:|.||..::..|...||||:
Zfish    52 NLYLSSMAISDLVIFL-SLPFDLYRLWKYVPWIFGEFVCRLSHYINEGCTNATILHITVLSMERY 115

  Fly   169 LAICHPLHLYAMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLN---------------YPLD 218
            ||||.|....|.:..:|...:|.|||..:.:||.|...|..::|.|               |.::
Zfish   116 LAICFPFKAKAAITKRRVKYVILALWGFALLSAAPMFFLMGVEYENETMPDPGSRQCKHTRYAIE 180

  Fly   219 HSRIEESAFCSMSPKIVNEIPVFEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNN 283
            ...:..:.:.|.:                :|..||..::.|||.:|.|:....::..|.......
Zfish   181 SGLLHTTIWVSTA----------------YFFCPMFCLLFLYGSIGRKLWKSRHELHGPNAAARQ 229

  Fly   284 RETRNSQMRKKTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNY----LDINEALFSIAGFA 344
            :..|.:       :::||.||..|.:||.|:|:.|.:|.:   :|:|    |..|   |::|...
Zfish   230 KVNRQT-------VKILAVVVSVFAICWLPYHIGRFLFTH---VDDYHSARLSQN---FNVASMV 281

  Fly   345 -YYVSCTVNPIVYSVMSRRYRVAFREL 370
             :|:|.:|||::|::||.:||.|.:.|
Zfish   282 LFYLSASVNPVLYNLMSNKYRSAVKRL 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 90/306 (29%)
7tm_1 85..356 CDD:278431 83/290 (29%)
mlnrXP_003200046.1 7tm_4 24..>153 CDD:304433 50/129 (39%)
7tm_1 33..294 CDD:278431 83/290 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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