DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and mlnr

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_002935793.1 Gene:mlnr / 100492328 XenbaseID:XB-GENE-940650 Length:364 Species:Xenopus tropicalis


Alignment Length:395 Identity:126/395 - (31%)
Similarity:195/395 - (49%) Gaps:55/395 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GFGEEDY----ACGTFNCSPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIR 95
            |.|..||    .|..:.||            ..|:...:.:||:...:.:.||:||.:..::|.|
 Frog    10 GGGNWDYDDIPECTEYLCS------------FFPITTLIPVTIVLLIVMVVGVIGNTITILIIRR 62

  Fly    96 HSAMHTATNYYLFSLAVSDLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFISEACTYVSVFTI 160
            :..|.|.||:||.|:|:|||:.|| .||.:::..|...|.:||...|:...||||.|||.::..|
 Frog    63 YKEMRTTTNFYLSSMAMSDLIILL-SLPFDLYRLWKSMPWIFGGFLCRFLHFISEGCTYSTILHI 126

  Fly   161 VAFSMERFLAICHPLHLYAMVGFKRAIRIITALWIVSFISAIPFGLLSDI-QYLNYPLDHSRIEE 224
            .|.|:||:||||.||....::...|...:|..||:.:.:||.||..:..| |..|...|.....|
 Frog   127 TALSIERYLAICFPLKSKVLITKTRVKCVIVFLWVFALLSAGPFYFVVGIAQMYNITNDSDTGWE 191

  Fly   225 S--AFCSMSPKIVNEIPVFEVSFCIFFVIPMILIILLYGRMGAKIRSRTNQKLGVQQGTNNRETR 287
            .  .|.::...::|   |.......:|.|||..:|:|||.:|.|:....|...|          |
 Frog   192 CRYTFYAVHSGLLN---VMMWVTTTYFFIPMFCLIILYGFIGKKLWKSQNSIRG----------R 243

  Fly   288 NSQMRKKT---VIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNY--LDINEALFSIAGFAYYV 347
            |:..|.|:   .:|:||.||:.|.:||.|||:.|::|   .|.:.|  :..::....:|...:|:
 Frog   244 NTAQRDKSHRQTMRILAVVVLAFIICWLPFHIGRIVF---ANTEGYEMMKFSQYFNVVAIQLFYL 305

  Fly   348 SCTVNPIVYSVMSRRYR-VAFRELLCGKAVGAYYNSGFARDHSSFRESSAYDRVHSVHVRASQHP 411
            |.::|||:|:::|::|| .|::.|....|....||: ...|.....||||     .||       
 Frog   306 SASINPILYNLISKKYRSAAYKLLRPSTAKKKTYNT-IKNDTGDKTESSA-----CVH------- 357

  Fly   412 NKFET 416
            |:|.|
 Frog   358 NEFVT 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 101/297 (34%)
7tm_1 85..356 CDD:278431 95/278 (34%)
mlnrXP_002935793.1 7tm_4 43..>225 CDD:304433 65/185 (35%)
7tm_1 52..314 CDD:278431 95/278 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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