DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CapaR and or70a11

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001124278.1 Gene:or70a11 / 100149635 ZFINID:ZDB-GENE-070806-12 Length:305 Species:Danio rerio


Alignment Length:348 Identity:77/348 - (22%)
Similarity:141/348 - (40%) Gaps:83/348 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NCSPKEFVAFVLGPQTLPLYKAV----LITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYL 107
            |.:.:..|..|.|....|.|..|    |:|:.   |||  :|.||.:.:.|:....:|... |.:
Zfish     3 NLTLRYSVLLVEGLSVSPPYSYVAFFSLLTVY---IFI--MVSNLWILLNIMIDKDLHQPM-YSI 61

  Fly   108 F-----------SLAVSDLLYLLFGLPTEVFLYWHQYPDLFGMPFCKIRAFI----SEACTYVSV 157
            :           |:.|..||..:...|:|.::.:.:         |.::||.    ..||.  ::
Zfish    62 YSNLPLRDVIGTSVIVPRLLRDVLTNPSERYITYVE---------CALQAFFIHLNGTACH--TI 115

  Fly   158 FTIVAFSMERFLAICHPLHLYAMVGFKRAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSR- 221
            ..|:||  :|::|||:||...|::..|..|::....||   ..::..|::..   |:..|.|.| 
Zfish   116 LMIMAF--DRYVAICNPLRYSAIMSNKMVIKLSAGAWI---SMSVMVGIMIS---LSVRLSHCRS 172

  Fly   222 IEESAFCS---------MSPKIVNEIPVFEVSFCI-FFVIPMILIILLYGRMGAKIRSRTNQKLG 276
            :.::.||.         .|.:|.|   ::.::|.: ..|:.|..|.|.|.|:..           
Zfish   173 LIQNHFCDNASLFKLSCESTEINN---IYGLTFTVSVIVVSMGSISLTYLRIAI----------- 223

  Fly   277 VQQGTNNRETRNSQMRKKTVIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIA 341
            |...:.|:..:.:.....|.:.:...::::.||..|   |.|....|....     |...:||: 
Zfish   224 VCISSKNKRNKKAITTCSTHLIVYTIMLVSGFVAVF---LHRFSEYYENRR-----IASIVFSV- 279

  Fly   342 GFAYYVSCTVNPIVYSVMSRRYR 364
                 |...:||::|.:..:..|
Zfish   280 -----VPPGLNPLIYGLQVKEIR 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 64/306 (21%)
7tm_1 85..356 CDD:278431 62/296 (21%)
or70a11NP_001124278.1 7tm_4 33..302 CDD:304433 68/318 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.