DRSC/TRiP Functional Genomics Resources

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Protein Alignment CapaR and or63b1

DIOPT Version :9

Sequence 1:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_009289715.1 Gene:or63b1 / 100147865 ZFINID:ZDB-GENE-070806-85 Length:312 Species:Danio rerio


Alignment Length:337 Identity:66/337 - (19%)
Similarity:122/337 - (36%) Gaps:90/337 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLL--YLLFGLPTEVFLYWH 131
            |::.::|..|    :|.||.:..:|.:..::|.....:|.||..:.|.  :.||           
Zfish    32 VVLILLFAAI----IVANLFIIGIIYKEKSLHEPMYVFLCSLCANQLCGSFALF----------- 81

  Fly   132 QYPDLFG---------MPFCKIRAFISEACTY--VSVFTIVAFSMERFLAICHPLHLYAMVGFKR 185
              |.:.|         :|.....|.|....||  |....:...|.:|::||||||..:.::...|
Zfish    82 --PFVLGNMLRSKTPEVPLTVCHAQIFALYTYGQVEFCNLAMMSYDRYVAICHPLEYHRIMSPAR 144

  Fly   186 AIRIITALWIVS-FISAIPFGLLSDIQYLNYPLDHSRIEESAFCSM--SPKIVNEIPVFEVSFCI 247
            .:.:|...|.:. .|.::.|.:...::.....||....::.....:  |....|.|... ....:
Zfish   145 TMTLIALGWSLQIIIFSLSFSVNVQLKLCGNVLDKVWCDQYMLVKLACSDTTPNNIAGM-TGIAV 208

  Fly   248 FFVIPMILIILLYG---RMGAKIRSRTNQK------------LGVQQGTNNR--ETRNSQMRKKT 295
            ....|::||:..|.   |:..|.:.:|.||            |....|.:..  ::|..::....
Zfish   209 TIGAPLLLILFSYAKILRVCLKFKGQTAQKSLYTCILHLISLLNFAVGCSFELIQSRFGKLPMPA 273

  Fly   296 VIRMLAAVVITFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAYYVSCTVNPIVYSVMS 360
            |:|::.:  :.|.||                        ..||             |||:|.|..
Zfish   274 VVRVILS--LYFLVC------------------------PPLF-------------NPIMYGVRL 299

  Fly   361 RRYRVAFRELLC 372
            ...:.|.::::|
Zfish   300 ANIKKALKKMIC 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 62/321 (19%)
7tm_1 85..356 CDD:278431 58/303 (19%)
or63b1XP_009289715.1 7tm_4 36..312 CDD:304433 65/333 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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