DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX8 and Cox8c

DIOPT Version :9

Sequence 1:NP_001262169.1 Gene:COX8 / 40390 FlyBaseID:FBgn0263911 Length:68 Species:Drosophila melanogaster
Sequence 2:NP_001034138.1 Gene:Cox8c / 75483 MGIID:1922733 Length:72 Species:Mus musculus


Alignment Length:42 Identity:11/42 - (26%)
Similarity:24/42 - (57%) Gaps:1/42 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SGPPTQRISTAEKVILGGGMCAASLFIP-AWVLYHIRDYKGD 67
            |..|.::|.:..:..:|..:...:.:|| |:||..::.:||:
Mouse    31 SESPQKKILSPTESAVGIVVFFTTFYIPAAYVLSSLKYFKGE 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX8NP_001262169.1 COX8 26..65 CDD:280450 9/38 (24%)
Cox8cNP_001034138.1 Cyt_c_Oxidase_VIII 29..72 CDD:238470 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16717
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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