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Protein Alignment COX8 and Cox8b
DIOPT Version :9
Sequence 1: | NP_001262169.1 |
Gene: | COX8 / 40390 |
FlyBaseID: | FBgn0263911 |
Length: | 68 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_036918.2 |
Gene: | Cox8b / 25250 |
RGDID: | 2386 |
Length: | 70 |
Species: | Rattus norvegicus |
Alignment Length: | 41 |
Identity: | 13/41 - (31%) |
Similarity: | 21/41 - (51%) |
Gaps: | 1/41 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 VSGPPTQRISTAEKVILGGGMCAASLFIPA-WVLYHIRDYK 65
:|..|.:..::|....:|..:..|...:|| |||.|:..||
Rat 25 ISSKPAKSPTSAMDQAVGMSVIIAGFMVPAGWVLSHLESYK 65
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
COX8 | NP_001262169.1 |
COX8 |
26..65 |
CDD:280450 |
11/39 (28%) |
Cox8b | NP_036918.2 |
COX8 |
26..66 |
CDD:396733 |
13/40 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1632471at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR16717 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
3 | 3.070 |
|
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