DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX8 and si:dkey-85n7.8

DIOPT Version :10

Sequence 1:NP_649328.1 Gene:COX8 / 40390 FlyBaseID:FBgn0263911 Length:68 Species:Drosophila melanogaster
Sequence 2:NP_001373245.1 Gene:si:dkey-85n7.8 / 100330915 ZFINID:ZDB-GENE-110411-127 Length:76 Species:Danio rerio


Alignment Length:58 Identity:17/58 - (29%)
Similarity:31/58 - (53%) Gaps:2/58 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVPAMRSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPA-WVLYHIRDYK 65
            ::|...|..:..|..|:.|.||..:|...:..:: ..:.|.:|..|| |:|:||.:|:
Zfish    12 VMVSRTRDIVHKRNSSIYSKPPKNKIGPGQSFLI-MSVFAVALLAPAGWILHHIPEYR 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX8NP_649328.1 Cyt_c_Oxidase_VIII 26..65 CDD:474920 12/39 (31%)
si:dkey-85n7.8NP_001373245.1 COX8 29..69 CDD:460523 13/41 (32%)

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