Protein Alignment Rpn10 and psmd4b

DIOPT Version :9

• Sequence 1: NP_001262168.1
• Gene: Rpn10 / 40388
• FlyBaseID: FBgn0015283
• Length: 396
• Species: Drosophila melanogaster
• Sequence 2: NP_001017624.1
• Gene: psmd4b / 550287
• ZFINID: ZDB-GENE-050417-96
• Length: 372
• Species: Danio rerio
• Alignment Length: 407
• Identity: 231/407 - (56%)
• Similarity: 288/407 - (70%)
• Gaps: 47/407 - (11%)

  Fly     1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEVLATLT 65
            |||||||:|.|||::.||||:.||||..|:|.:|::|.:|.||||||||||:|::|..|||.|||
Zfish     1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIICHSKTRSNPENNVGLITMANNCEVLTTLT 65

  Fly    66 SDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKR 130
            .|.|||.||:|.|||:|.|:..||||:|||.|||||||||||||:.|||||:..:|.||||.|||
Zfish    66 PDTGRILSKLHAVQPRGVISFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDQEKDLVKMAKR 130

  Fly   131 LKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGTGSHLVSVPRGSVLSDALLSSPIIQGEDGM 195
            ||||||:|||::||:...|.|.||.|:|.||||:|.|||||:||.|..|:||||||||:.||
Zfish   131 LKKEKVSVDIINFGEEEVNTEKLTVFVNTLNGKEGVGSHLVTVPPGPSLADALLSSPIMAGE--- 192

  Fly   196 GGA--GLGGNVFEFGVDPNEDPELALALRVSMEEQRQRQESEQRRANPDGAPPTGGDAGGGGGVS 258
            ||.  |||.:.|||||||:.||||||||||||||||||||.|.|||    |..:..|||
Zfish   193 GGTIMGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRA----AVASAADAG------ 247

  Fly   259 GSGPGNEESAGAENEANTEEAMLQRALALSTETPEDNLPDFANMTEEEQIAFAMQMSMQ------ 317
            .|.|..:||         |.|:|:.:.|.:       ||||:.|||:||||:|:|||||
Zfish   248 VSSPTADES---------ENALLKMSTAPA-------LPDFSRMTEDEQIAYALQMSMQGGEFGG 296

  Fly   318 -DAPD-DSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSL 380
             :|.| |:....|      |:.||.:.:||| :|:.||.||||||||||||||.:||:|:|:|||
Zfish   297 SEAMDVDTAAAAA------ESEAPKEDEEDY-DVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSL 354

  Fly   381 -NKDKDKKSDGKDSQKK 396
             ::::.|..:||...:|
Zfish   355 ASQNRTKPPEGKKEDEK 371

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn10	NP_001262168.1	VWA_26S_proteasome_subunit	1..187	CDD:238729	123/185 (66%)
psmd4b	NP_001017624.1	VWA_26S_proteasome_subunit	1..187	CDD:238729	123/185 (66%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170580368
Domainoid	1	1.000	161	1.000	Domainoid score	I3984
eggNOG	1	0.900	-	-		E1_COG5148
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	415	1.000	Inparanoid score	I1803
OMA	1	1.010	-	-		QHG54175
OrthoDB	1	1.010	-	-		D1244685at2759
OrthoFinder	1	1.000	-	-		FOG0004243
OrthoInspector	1	1.000	-	-		otm24528
orthoMCL	1	0.900	-	-		OOG6_102002
Panther	1	1.100	-	-	O	PTHR10223
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1199
SonicParanoid	1	1.000	-	-		X2982
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	15	14.800