Protein Alignment Rpn10 and psmd4a

DIOPT Version :9

• Sequence 1: NP_001262168.1
• Gene: Rpn10 / 40388
• FlyBaseID: FBgn0015283
• Length: 396
• Species: Drosophila melanogaster
• Sequence 2: NP_001002112.1
• Gene: psmd4a / 415202
• ZFINID: ZDB-GENE-040625-104
• Length: 372
• Species: Danio rerio
• Alignment Length: 411
• Identity: 232/411 - (56%)
• Similarity: 280/411 - (68%)
• Gaps: 55/411 - (13%)

  Fly     1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEVLATLT 65
            |||||||:|.|||::.||||:.||||..|:|.:|:||.:|.||||||||||:|::|..|||.|||
Zfish     1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITMANNCEVLTTLT 65

  Fly    66 SDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKR 130
            .|.|||.||:|.|||.|:|:..||||:|||.||||||||||||||.|||||:...|.||||.|||
Zfish    66 PDTGRILSKLHAVQPLGKISFCTGIRVAHLALKHRQGKNHKMRIVAFVGSPVEDNEKDLVKMAKR 130

  Fly   131 LKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGTGSHLVSVPRGSVLSDALLSSPIIQGEDGM 195
            ||||||||||::||:...|.|.||||:|.||||:|||||||:||.|..|:||||||||:.||
Zfish   131 LKKEKVNVDIINFGEEEMNTEKLTAFVNTLNGKEGTGSHLVTVPPGPSLADALLSSPILAGE--- 192

  Fly   196 GGA--GLGGNVFEFGVDPNEDPELALALRVSMEEQRQRQESEQRRANPD-----GAPPTGGDAGG 253
            ||.  |||.:.|||||||:.||||||||||||||||||||.|.|||...     |.|.|..|
Zfish   193 GGTMIGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAVQSAAEAGIPTTASD--- 254

  Fly   254 GGGVSGSGPGNEESAGAENEANTEEAMLQRALALSTETPEDN---LPDFANMTEEEQIAFAMQMS 315
                                 .:|||:|:    :|...||..   ||||::||||||||:|||||
Zfish   255 ---------------------ESEEALLK----MSASQPESGVAALPDFSSMTEEEQIAYAMQMS 294

  Fly   316 MQDAPDDSVTQQAKRPKTDEANAPMDV----DEDYSEVIGDPAFLQSVLENLPGVDPQSEAVRDA 376
            :..         .:..::.:..||:|.    :||..:|:.||.||||||||||||||.:||:|:|
Zfish   295 LAG---------GEFGESMDTGAPIDTAESKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNA 350

  Fly   377 VGSLNKDKDKKSDG-KDSQKK 396
            :|||......|.:| ||.:||
Zfish   351 MGSLASQSGNKPEGKKDDEKK 371

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn10	NP_001262168.1	VWA_26S_proteasome_subunit	1..187	CDD:238729	128/185 (69%)
psmd4a	NP_001002112.1	VWA_26S_proteasome_subunit	1..187	CDD:238729	128/185 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170580369
Domainoid	1	1.000	161	1.000	Domainoid score	I3984
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H55691
Inparanoid	1	1.050	415	1.000	Inparanoid score	I1803
OMA	1	1.010	-	-		QHG54175
OrthoDB	1	1.010	-	-		D1244685at2759
OrthoFinder	1	1.000	-	-		FOG0004243
OrthoInspector	1	1.000	-	-		otm24528
orthoMCL	1	0.900	-	-		OOG6_102002
Panther	1	1.100	-	-	LDO	PTHR10223
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1199
SonicParanoid	1	1.000	-	-		X2982
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	14	13.940