Protein Alignment Rpn10 and pof10

DIOPT Version :9

• Sequence 1: NP_001262168.1
• Gene: Rpn10 / 40388
• FlyBaseID: FBgn0015283
• Length: 396
• Species: Drosophila melanogaster
• Sequence 2: NP_596201.1
• Gene: pof10 / 2539767
• PomBaseID: SPBC1703.06
• Length: 662
• Species: Schizosaccharomyces pombe
• Alignment Length: 241
• Identity: 53/241 - (21%)
• Similarity: 93/241 - (38%)
• Gaps: 90/241 - (37%)

  Fly    25 RLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEVLA-TLTSDAGRIFSKMHLVQP-------- 80
            |...:|:.||.:.|.   |||.:..|::|:|..|:..: |:........||:..::|
pombe   473 RNAARREPINCILLD---SNPLSLKGVITMSKHVKSWSYTIPKPFVNKRSKVLPLRPSVTHDNLS 534

  Fly    81 ------KGEI--NLLTGI-RIAHLVLKHRQGKNHKM--------------------RIVVFVGSP 116
                  |.|:  .::.|: :||       |.:..||                    .|:.:| :.
pombe   535 KSSDYSKNEVEREIMLGLDQIA-------QERREKMEARQKFEQHFGEGLVGLSEEEIIAYV-TM 591

  Fly   117 INHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGTGSHLVSVPRGSVLSD 181
            ::.||     :|||:.:..::||.:. .|...|:|..|:.:|||     :.:|
pombe   592 LSQEE-----EAKRMVQLSMDVDKIE-EDFKENDEQATSSLNAL-----SSNH------------ 633

  Fly   182 ALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSMEE 227
               ..|..|           .||.|.    ||..::.||:|:|:.|
pombe   634 ---EPPQEQ-----------ANVAEL----NEQEQIELAMRLSLME 661

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn10	NP_001262168.1	VWA_26S_proteasome_subunit	1..187	CDD:238729	41/199 (21%)
pof10	NP_596201.1	F-box-like	31..77	CDD:289689
		WD40	124..507	CDD:225201	12/36 (33%)
		WD40 repeat	127..166	CDD:293791
		WD40 repeat	171..210	CDD:293791
		WD40	<208..>282	CDD:295369
		WD40 repeat	221..262	CDD:293791

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10223
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100