Protein Alignment Rpn10 and rpn-10

DIOPT Version :9

• Sequence 1: NP_001262168.1
• Gene: Rpn10 / 40388
• FlyBaseID: FBgn0015283
• Length: 396
• Species: Drosophila melanogaster
• Sequence 2: NP_492809.1
• Gene: rpn-10 / 172977
• WormBaseID: WBGene00004466
• Length: 346
• Species: Caenorhabditis elegans
• Alignment Length: 392
• Identity: 160/392 - (40%)
• Similarity: 241/392 - (61%)
• Gaps: 51/392 - (13%)

  Fly     1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEVLATLT 65
            ||.||||||.|||::.||||:.||||..|:|.:|||...|||:||||.||:::::|:|:||::|:
 Worm     1 MVQESTMICVDNSEYMRNGDFQPTRLQSQQDAVNLVTQCKLRANPENAVGILSMANSVQVLSSLS 65

  Fly    66 SDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINH-EEGDLVKQAK 129
            ::.||:..|.|.::|.|:.|.:.||:||||.|||||.:|||||:|:|:|||:.. |..:|||.||
 Worm    66 TEQGRLMMKNHSIEPFGKCNFIAGIKIAHLALKHRQNRNHKMRVVLFIGSPLEEIEMNELVKIAK 130

  Fly   130 RLKKEKVNVDIVSFGDH-GNNNEILTAFINALNGKDGTGSHLVSVPRGSVLSDALLSSPIIQGED 193
            ::|||||..|::.||:: .:.:|..:.|::.||||:|:||.|:.||:||.|:||||.|.:.:.||
 Worm   131 KMKKEKVLCDVIMFGENESDGHEKFSTFVDTLNGKEGSGSSLIVVPQGSSLTDALLQSSVCKNED 195

  Fly   194 GMGGAGLGGNVFE--FGVDPNEDPELALALRVSMEEQRQRQESEQRRANPDGAPPTGGDAGGGGG 256
            |....|.|||..:  ||:|...||:|||||||||||:|.||.:.               |...||
 Worm   196 GQAAFGGGGNGMDNAFGMDVENDPDLALALRVSMEEERARQAAA---------------AAANGG 245

  Fly   257 VSGSGPGNEESAGAENEANTEEAMLQRALALSTETPEDNLPDFANMTEEEQIAFAMQMSMQD-AP 320
            .:.||...|.:|.|                  ...|.:.: |...||||:|:.:|:::|||: ||
 Worm   246 AADSGADAEVAAAA------------------AAVPLEEM-DMGAMTEEQQLEWALRLSMQENAP 291

  Fly   321 DDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSLNKDKD 385
            .:.  .|.:..:.|...||....::..:::.:|..||.::::||..:.:.:          .||:
 Worm   292 AEQ--PQVQHEQMDVDGAPAVGGDNLDDLMNNPELLQQIVDDLPAANAEKD----------DDKE 344

  Fly   386 KK 387
            ||
 Worm   345 KK 346

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn10	NP_001262168.1	VWA_26S_proteasome_subunit	1..187	CDD:238729	99/187 (53%)
rpn-10	NP_492809.1	vWFA	1..189	CDD:294047	99/187 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159126
Domainoid	1	1.000	137	1.000	Domainoid score	I3036
eggNOG	1	0.900	-	-		E1_COG5148
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H55691
Inparanoid	1	1.050	284	1.000	Inparanoid score	I1731
Isobase	1	0.950	-	0.815465	Normalized mean entropy	S715
OMA	1	1.010	-	-		QHG54175
OrthoDB	1	1.010	-	-		D1244685at2759
OrthoFinder	1	1.000	-	-		FOG0004243
OrthoInspector	1	1.000	-	-		oto19480
orthoMCL	1	0.900	-	-		OOG6_102002
Panther	1	1.100	-	-	LDO	PTHR10223
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1199
SonicParanoid	1	1.000	-	-		X2982
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	16	15.790