DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk12 and SGV1

DIOPT Version :10

Sequence 1:NP_649325.2 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_015487.1 Gene:SGV1 / 856290 SGDID:S000006365 Length:657 Species:Saccharomyces cerevisiae


Alignment Length:437 Identity:152/437 - (34%)
Similarity:231/437 - (52%) Gaps:72/437 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   737 PPVIPGSEELSGDDDVIDSPEDFDAPAVGTVHGHGGGPGTTRQRPVILNRRDSRNNV-------- 793
            |.|:|.:|              |:...:|.|          :..|.|  :||::.|:        
Yeast     7 PAVLPKTE--------------FNKYKIGKV----------KSTPAI--QRDAKTNLTYIKLRKR 45

  Fly   794 ---RDWGERCVDVFE----MIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVRE 851
               :.:|  |. ||:    ...::|:||:|:|||.....|...||:||:.:..||:.|||||.||
Yeast    46 SSEKVYG--CT-VFQNHYREDEKLGQGTFGEVYKGIHLETQRQVAMKKIIVSVEKDLFPITAQRE 107

  Fly   852 IKILRQLNHRNIVNLHEIVTDKQ----DAVEFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEEN 912
            |.||::|||:||:.|.|:|.|..    :|......| |||::..||..||.|:|.:..::....:
Yeast   108 ITILKRLNHKNIIKLIEMVYDHSPDITNAASSNLHK-SFYMILPYMVADLSGVLHNPRINLEMCD 171

  Fly   913 NASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLARLYNA--DDRERP------ 969
            ..::|.|:|:||||.|...|:|||||.:|||:::.|.:|||||||||||..  .:.:.|      
Yeast   172 IKNMMLQILEGLNYIHCAKFMHRDIKTANILIDHNGVLKLADFGLARLYYGCPPNLKYPGGAGSG 236

  Fly   970 --YTNKVITLWYRPPELLLGEERYGPSIDVWSCGCILGELFVKRPLFQANAEMAQLETISKICGS 1032
              ||:.|:|.|||.|||:||:::|..::|:|..||:..|.|.|:|:.|...::.|...|.|:.|:
Yeast   237 AKYTSVVVTRWYRAPELVLGDKQYTTAVDIWGVGCVFAEFFEKKPILQGKTDIDQGHVIFKLLGT 301

  Fly  1033 PVPAVWPNVIKLP--LFHTLKQKKTHRRRLREDF-EFMPAPALDLLDKMLDLDPDKRITAEDALR 1094
            |....|.....||  ...|...|.|    |||.| :::....||.|.::|.|||.||:||..|..
Yeast   302 PTEEDWAVARYLPGAELTTTNYKPT----LRERFGKYLSETGLDFLGQLLALDPYKRLTAMSAKH 362

  Fly  1095 SPWLRKINPDEMPTPQ--LPTWQDCHELWSKKRRRQMREQQESLPPT 1139
            .||.::   |.:|:.:  ||| ::.||...|:.:.:|.:......||
Yeast   363 HPWFKE---DPLPSEKITLPT-EESHEADIKRYKEEMHQSLSQRVPT 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_649325.2 STKc_CDK12 796..1098 CDD:270847 128/322 (40%)
SGV1NP_015487.1 STKc_BUR1 50..366 CDD:270849 128/323 (40%)

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