DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk12 and SWE1

DIOPT Version :9

Sequence 1:NP_001262167.1 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_012348.1 Gene:SWE1 / 853252 SGDID:S000003723 Length:819 Species:Saccharomyces cerevisiae


Alignment Length:740 Identity:146/740 - (19%)
Similarity:271/740 - (36%) Gaps:215/740 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 ELDRYNHQPSTPPHKRR--KFSDGR--------EVGLGNFEHSRHHS---GKYERYSRDRYSRRS 406
            |.|.:....|||.:|.:  .:|:.:        .:.|.|...|..:|   ||.|....:....:.
Yeast    35 ESDDFAIGGSTPTNKLKFYPYSNNKLTRSTGTLNLSLSNTALSEANSKFLGKIEEEEEEEEEGKD 99

  Fly   407 SRSPSVQHSRSRQSPSGGLSSGSNAFRHGGSHKHKYGTTVSSTPSHTTRTSKRASGTGTSGDRYS 471
            ..  ||.....|.||               .|:::         |.||..:||:           
Yeast   100 EE--SVDSRIKRWSP---------------FHENE---------SVTTPITKRS----------- 127

  Fly   472 RSPRTSSRYMESSPPSPVGASGSHHYHHRRSPRMRQRTRGDSRRRSPSSASSESSASRSRSP-TS 535
             :.:|:         ||:...   .::.|..|      :.|:|..:.||:||.|.|..::|. ||
Yeast   128 -AEKTN---------SPISLK---QWNQRWFP------KNDARTENTSSSSSYSVAKPNQSAFTS 173

  Fly   536 RDLKHKREEYIKKIS-ETSLF-------------AELVKDRHKRQKALKEIIERQEENSNSNSNG 586
            ..|       :.|:| :|||:             :.||:.|..:...|         :|:.|::.
Yeast   174 SGL-------VSKMSMDTSLYPAKLRIPETPVKKSPLVEGRDHKHVHL---------SSSKNASS 222

  Fly   587 ALTIN------DNSSSVDGNTPNAADGRSAPGSGTPAAAS---------------------TTSN 624
            :|:::      ||:...|....::...::.|....|...|                     :.:|
Yeast   223 SLSVSPLNFVEDNNLQEDLLFSDSPSSKALPSIHVPTIDSSPLSEAKYHAHDRHNNQTNILSPTN 287

  Fly   625 GLQALGSKPDLDLNNIPMPNKQNDSVVSNPASNADVPDSVAQLKQPLLVPPFSASKNNIKPKSLT 689
            .|....|...|..|......:..:||:   ..|.::.:|:.|.|..|    :...:|        
Yeast   288 SLVTNSSPQTLHSNKFKKIKRARNSVI---LKNRELTNSLQQFKDDL----YGTDEN-------- 337

  Fly   690 SLPLPPGMNVLDLAGAR-SPSPGQ---KKESDEKNVTSSGSANKSVLNLPMPPVIPGSEELSGDD 750
               .||.:.:......| :|.|.|   :.::|.....|:.:..||::. ........|..||...
Yeast   338 ---FPPPIIISSHHSTRKNPQPYQFRGRYDNDTDEEISTPTRRKSIIG-ATSQTHRESRPLSLSS 398

  Fly   751 DVIDSPEDFDAPAVGTVHGHGGGPGTTRQRPVILNRRDSRNNVRDWGERCVDVFEMIAQIGEGTY 815
            .::.:....:..::.:.   ...|..:::|.:..|:..:..:     ....:.|..:..||:|.:
Yeast   399 AIVTNTTSAETHSISST---DSSPLNSKRRLISSNKLSANPD-----SHLFEKFTNVHSIGKGQF 455

  Fly   816 GQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNHRNIVNLHEIVTDKQ------ 874
            ..||:.....||...|:|.::  ..|.......:.|||||.::.       ::|..|::      
Yeast   456 STVYQVTFAQTNKKYAIKAIK--PNKYNSLKRILLEIKILNEVT-------NQITMDQEGKEYII 511

  Fly   875 DAVEFRKDKGSFYLVFEYMDHDLMGLLESGMVD-FNEENNASIMKQLLD------------GLNY 926
            |.:...|.:.|:|::.|        |.|:|.:| |.:|...:..|:|.|            .|.:
Yeast   512 DYISSWKFQNSYYIMTE--------LCENGNLDGFLQEQVIAKKKRLEDWRIWKIIVELSLALRF 568

  Fly   927 CHKK-NFLHRDIKCSNILMNNRGKVKLADFGLA--------RLYNADDRERPYTNKVITLWYRPP 982
            .|.. :.:|.|:|.:|:::...|.:||.|||:|        ...|..|||           |..|
Yeast   569 IHDSCHIVHLDLKPANVMITFEGNLKLGDFGMATHLPLEDKSFENEGDRE-----------YIAP 622

  Fly   983 ELLLGEERYGPSIDVWSCGCILGEL 1007
            | ::.:..|....|::|.|.::.|:
Yeast   623 E-IISDCTYDYKADIFSLGLMIVEI 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_001262167.1 STKc_CDK12 796..1098 CDD:270847 57/240 (24%)
S_TKc 804..1098 CDD:214567 57/232 (25%)
SWE1NP_012348.1 PTKc_Wee1_fungi 443..791 CDD:270954 57/233 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 56 1.000 Inparanoid score I1799
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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