DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk12 and AT1G67580

DIOPT Version :9

Sequence 1:NP_001262167.1 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_001154456.1 Gene:AT1G67580 / 843079 AraportID:AT1G67580 Length:752 Species:Arabidopsis thaliana


Alignment Length:854 Identity:242/854 - (28%)
Similarity:369/854 - (43%) Gaps:210/854 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 SGKYERY---------SRDRYSRRSSRSPSVQHSRSRQSPSGGLSSG----SNAFRHGGSHKHKY 442
            :|:..||         |..|:|||.|...:..::..|   :|.:.:|    || .|||...:.|.
plant     3 AGRNIRYPDHELRDQESNSRFSRRDSAYANEDYNHVR---NGAIDNGKGRVSN-LRHGDRDRIKS 63

  Fly   443 GTTVSSTPSHTTRTSKRASGTGTSGDRYSRSPRTSSRYMESSPPSPVGASGSHHYHHRRSPRMRQ 507
            |.        ....:|..|    ||.|.|:|...|........|...|.|..             
plant    64 GA--------RQEENKMVS----SGFRLSKSNPGSREVFIDLGPKRCGFSAR------------- 103

  Fly   508 RTRGDSRRRSPSSASSESSA-----SRSRSPTSRDLKHKREEYIKKISETSLFAELVKDR--HKR 565
                 |..|.|...||||.:     |.|.:..:..:|.........:.:...|:.:|.||  |:|
plant   104 -----SVDREPGELSSESGSDDLIESESLAKVNGVVKEVENRAQSPVEKKRKFSPIVWDRDDHER 163

  Fly   566 QKALKE--------------IIERQEENSNSNSNGALTINDNSSSVDGN---TPNAADGRSAPGS 613
            ....:.              :::|..::.             |.|..||   :|..:|...    
plant   164 SNLSRNEKPVEVTPLPPPPPLVKRSSQSP-------------SVSCGGNSHYSPAKSDMHQ---- 211

  Fly   614 GTPAAASTTSNGLQALGSKPDLDLNNIPMPNKQNDSVVSNPASNADVPDS---VAQLKQPLLVPP 675
             .|.....::..:.||  .|.::::::         .|...:|||:..|.   ...|::...:|.
plant   212 -DPVEVGVSAVSMPAL--SPSVEMSSL---------CVVEQSSNAEQDDKQEHATHLEEDENMPT 264

  Fly   676 --FSASK---NNIKP------------KSLTSLPLP-----------PGMNVLDLAGARSPS--- 709
              .|:|:   .|..|            |.....|.|           |.:..|...|.||..   
plant   265 RHISSSRWAAGNSSPTDEVEIVEEVGEKKRRKKPFPVQGRFRNTSQTPEVGELVREGYRSSDSDE 329

  Fly   710 ------PGQKKESDEKNVTSSGSANKSVLNLPMPPVIPGSEELSGDDDVI--DSPEDFDAPAVGT 766
                  ||.:.:.:|::...|...............:....|...||:.:  ::||         
plant   330 RGHHSLPGSRDDFEERDAVKSDKMEIDEEEHRRENSVDSLSETDSDDEYVRHETPE--------- 385

  Fly   767 VHGHGGGPGTTRQRPVILNRRDSRNNVRDWGERCVDVFEMIAQIGEGTYGQVYKARDHHTNDMVA 831
                   |.:|..|.:.:.:          |.|.||.||.:.:|.|||||.||:|:|..|.::||
plant   386 -------PASTPLRSINMLQ----------GCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVA 433

  Fly   832 LKKVRLEHEKEGFPITAVREIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHD 896
            ||||::|.|:||||:|::|||.||...:|.:||::.|:|..        ....|.::|.|||:||
plant   434 LKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVG--------SSLDSIFMVMEYMEHD 490

  Fly   897 LMGLLESGMVDFNEENNASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLARLY 961
            |..|:|:....|::.....:|.|||:|:.|.|....||||:|.||:|:||||::|:.||||||.|
plant   491 LKALMETMKQRFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQY 555

  Fly   962 NADDRERPYTNKVITLWYRPPELLLGEERYGPSIDVWSCGCILGELFVKRPLFQANAEMAQLETI 1026
            .:.  .:|||:.|:|||||.||||||.::|..:||:||.|||:.||.:|.|||....|..||:.|
plant   556 GSP--LKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLMKAPLFNGKTEFDQLDKI 618

  Fly  1027 SKICGSPVPAVWPNVIKLPLFHTLKQK--KTHRRRLREDF---EFMPAPAL-----DLLDKMLDL 1081
            .:|.|:|..::||...|||   .:|..  |.....||:.|   .|..||.|     |||:|:|..
plant   619 FRILGTPNESIWPGFSKLP---GVKVNFVKHQYNLLRKKFPATSFTGAPVLSDAGFDLLNKLLTY 680

  Fly  1082 DPDKRITAEDALRSPWLRKINPDEMPTPQ----LPTWQDCHELWSKKRRRQM--------REQQE 1134
            ||::|||..:||:..|.|     |:|.|:    :||:...|.  ..:|.|:|        .::::
plant   681 DPERRITVNEALKHDWFR-----EVPLPKSKDFMPTFPAQHA--QDRRGRRMVKSPDPLEEQRRK 738

  Fly  1135 SLPPTVIAS 1143
            .|..|.:.|
plant   739 ELTQTELGS 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_001262167.1 STKc_CDK12 796..1098 CDD:270847 140/311 (45%)
S_TKc 804..1098 CDD:214567 136/303 (45%)
AT1G67580NP_001154456.1 STKc_CDC2L1 400..697 CDD:173741 139/309 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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