DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk12 and cdk16

DIOPT Version :10

Sequence 1:NP_649325.2 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:XP_021334043.1 Gene:cdk16 / 559750 ZFINID:ZDB-GENE-030131-2939 Length:537 Species:Danio rerio


Alignment Length:417 Identity:149/417 - (35%)
Similarity:213/417 - (51%) Gaps:78/417 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   711 GQKKESDEKNVTSSGSANKSV--------------------LNLPMPPVIPGS--EELSGDDDVI 753
            |...|||:.:.|||...:..|                    |:||....:|..  |:.|     :
Zfish   105 GSDGESDQASATSSDEVHSPVRVRLRNNPGRKISTEDINKRLSLPADIRLPDGYLEKFS-----L 164

  Fly   754 DSPEDFDAPAVGTVHGHGGGPGTTRQRPVILNRRDSRNNVRDWGERCVDVFEMIAQIGEGTYGQV 818
            :||. ||.|                     |:||..|.::.:.|...::.:..:.::|||||..|
Zfish   165 NSPL-FDKP---------------------LSRRLRRVSLSEIGFGKLETYVKLDKLGEGTYATV 207

  Fly   819 YKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNHRNIVNLHEIV-TDKQDAVEFRKD 882
            ||.|...|:::||||::||||| ||.|.||:||:.:|:.|.|.|||.||:|: |.|         
Zfish   208 YKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTQK--------- 262

  Fly   883 KGSFYLVFEYMDHDLMGLLESGMVDFNEENNASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNR 947
              |..|||||:|.||...|:......:..|....:.|||.||||||::..||||:|..|:|:|:|
Zfish   263 --SLTLVFEYLDKDLKQYLDDCGNSIHMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINDR 325

  Fly   948 GKVKLADFGLARLYNADDRERPYTNKVITLWYRPPELLLGEERYGPSIDVWSCGCILGELFVKRP 1012
            |::|||||||||..:..  .:.|:|:|:|||||||::|||...|...||:|..|||..|:...||
Zfish   326 GELKLADFGLARAKSIP--TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRP 388

  Fly  1013 LFQANAEMAQLETISKICGSPVPAVWPNVIKLPLFHTLKQKK-------THRRRLREDFEFMPAP 1070
            ||..:....:|..|.|:.|:|....||.:.....|.:....:       .|..||..|       
Zfish   389 LFPGSTVEEELHFIFKLLGTPTEETWPGITSNEEFISYNYPRYRADCLHNHTPRLDND------- 446

  Fly  1071 ALDLLDKMLDLDPDKRITAEDALRSPW 1097
            .::||.|:|..:..|||.||:|:|.|:
Zfish   447 GVELLSKLLQFEGKKRIAAEEAMRHPY 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_649325.2 STKc_CDK12 796..1098 CDD:270847 126/310 (41%)
cdk16XP_021334043.1 STKc_PCTAIRE1 190..486 CDD:270854 125/305 (41%)

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